RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SMYD4Q8IYR2 804 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 GUF1Q8N442 669 aaKnown RBP12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CHST14Q8NCH0 376 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SERPINB11Q96P15 392 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TCEAL2Q9H3H9 227 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CPED1A4D0V7 1026 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 EME2A4GXA9 379 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 M0QYV0 167 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SMAD6O43541 496 aaKnown RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 WT1P19544 449 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RBMS1P29558 406 aaKnown RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DPYDQ12882 1025 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZNF177Q13360 481 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NNTQ13423 1086 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TAF5Q15542 800 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZSCAN23Q3MJ62 389 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ARTNQ5T4W7 220 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TMEM270Q6UE05 265 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 C14orf80Q86SX3 495 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SH2D3CQ8N5H7 860 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 OR2A12Q8NGT7 310 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 EXTL1Q92935 676 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 HSFY1Q96LI6 401 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PSMB7Q99436 277 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 FEM1AQ9BSK4 669 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DNAI2Q9GZS0 605 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ABCG4Q9H172 646 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DNAJC28Q9NX36 388 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RP1L1Q8IWN7 2480 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CREBBPQ92793 2442 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PRRC2CQ9Y520 2896 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TYW5A2RUC4 315 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 KCNU1A8MYU2 1149 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SUV39H1O43463 412 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 BNIP3LO60238 219 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SNAP91O60641 907 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 GCATO75600 419 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TNFSF15O95150 251 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CSF2P04141 144 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FAM87AP0C7U9 286 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SRCP12931 536 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NME1P15531 152 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HNRNPA2B1P22626 353 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 GPD2P43304 727 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DNM1Q05193 864 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 EIF2B5Q13144 721 aaKnown RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC12A1Q13621 1099 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DEFB133Q30KQ1 61 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ACCSLQ4AC99 568 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FAM46CQ5VWP2 391 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FBXL22Q6P050 247 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DENND1BQ6P3S1 775 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 RBFAQ8N0V3 343 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 IFT43Q96FT9 208 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CCNL2Q96S94 520 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 KIAA1257Q9ULG3 409 aa12.2□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LRBAP50851 2863 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SPTY2D1-AS1A0A0U1RR47 76 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 C1QTNF3-AMACRE9PGA6 284 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 I6L893 689 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ALOX15BO15296 676 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ZNF821O75541 412 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FBXO21O94952 628 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TRUB2O95900 331 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PAEPP09466 180 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ALPPL2P10696 532 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 RPL13P26373 211 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 AKT2P31751 481 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CHRNA3P32297 505 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PMS1P54277 932 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SULT2A1Q06520 285 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 C6orf132Q5T0Z8 1188 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ZCCHC8Q6NZY4 707 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NEK5Q6P3R8 708 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 RBM44Q6ZP01 1051 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PTAR1Q7Z6K3 402 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC35F3Q8IY50 421 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LMO3Q8TAP4 145 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 VOPP1Q96AW1 172 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FAM149B1Q96BN6 582 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 BTN2A3PQ96KV6 586 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 KLF6Q99612 283 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 USP29Q9HBJ7 922 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ANLNQ9NQW6 1124 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 RABGEF1Q9UJ41 708 aa12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ATXN7L1Q9ULK2 861 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ZFC3H1O60293 1989 aaKnown RBP12.19□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TCAF2A6NFQ2 919 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 F5H5T6 163 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 KPNA3O00505 521 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NTN3O00634 580 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 MUSKO15146 869 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms