RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 RPL10LQ96L21 214 aaKnown RBP17.77■□□□□ 0.44
HDAC11-202ENST00000402259 MAK16Q9BXY0 300 aaKnown RBP17.77■□□□□ 0.44
HDAC11-202ENST00000402259 FAM126AQ9BYI3 521 aaPredicted RBP17.77■□□□□ 0.44
HDAC11-202ENST00000402259 RAD54BQ9Y620 910 aa17.77■□□□□ 0.44
HDAC11-202ENST00000402259 hCG_1818297A0A087WSY0 165 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 DDX3YO15523 660 aaKnown RBP17.76■□□□□ 0.43
HDAC11-202ENST00000402259 SYNCRIPO60506 623 aaKnown RBP17.76■□□□□ 0.43
HDAC11-202ENST00000402259 PRAMEF11O60813 436 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 APBB3O95704 486 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 CD160O95971 181 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 EPHX1P07099 455 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 CETN2P41208 172 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 WASP42768 502 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 PAPOLAP51003 745 aaKnown RBP17.76■□□□□ 0.43
HDAC11-202ENST00000402259 ANGPT1Q15389 498 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 INO80DQ53TQ3 878 aaPredicted RBP17.76■□□□□ 0.43
HDAC11-202ENST00000402259 MEI1Q5TIA1 1274 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 TSTD1Q8NFU3 115 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 ALG3Q92685 438 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 ISG20Q96AZ6 181 aaKnown RBP17.76■□□□□ 0.43
HDAC11-202ENST00000402259 PDFQ9HBH1 243 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 EBF1Q9UH73 591 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 MFHAS1Q9Y4C4 1052 aa17.76■□□□□ 0.43
HDAC11-202ENST00000402259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
HDAC11-202ENST00000402259 TTC34A8MYJ7 566 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 APOL1O14791 398 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 MFSD11O43934 449 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 ALDH1A2O94788 518 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 MT-CO1P00395 513 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 HLA-EP13747 358 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 COL9A1P20849 921 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 NRLP54845 237 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 IL10RBQ08334 325 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 GALNT2Q10471 571 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 DLG2Q15700 870 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 RASSF3Q86WH2 238 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 ZNF354CQ86Y25 554 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 RFX6Q8HWS3 928 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 CCDC50Q8IVM0 306 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 PLPP6Q8IY26 295 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 PCDH20Q8N6Y1 951 aaKnown RBP17.75■□□□□ 0.43
HDAC11-202ENST00000402259 PLD5Q8N7P1 536 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 ATP11CQ8NB49 1132 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 NELL1Q92832 810 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 ZNF599Q96NL3 588 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 PRSS16Q9NQE7 514 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 KCND1Q9NSA2 647 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 IPO11Q9UI26 975 aaKnown RBP17.75■□□□□ 0.43
HDAC11-202ENST00000402259 PYCARDQ9ULZ3 195 aa17.75■□□□□ 0.43
HDAC11-202ENST00000402259 DFFAO00273 331 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 ALOX15BO15296 676 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 ZBTB24O43167 697 aaPredicted RBP17.74■□□□□ 0.43
HDAC11-202ENST00000402259 MX2P20592 715 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 NUMBP49757 651 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 CSTF1Q05048 431 aaKnown RBP17.74■□□□□ 0.43
HDAC11-202ENST00000402259 RFTN1Q14699 578 aaPredicted RBP17.74■□□□□ 0.43
HDAC11-202ENST00000402259 C9orf64Q5T6V5 341 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 TMCO4Q5TGY1 634 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 KIAA1211LQ6NV74 962 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 C22orf39Q6P5X5 142 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 LINGO4Q6UY18 593 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 BZW1Q7L1Q6 419 aaKnown RBP17.74■□□□□ 0.43
HDAC11-202ENST00000402259 OR2T3Q8NH03 318 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 PTPRN2Q92932 1015 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 FATE1Q969F0 183 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 CCDC114Q96M63 670 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 TSGA13Q96PP4 275 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 HHIPQ96QV1 700 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 SP110Q9HB58 689 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 POLR3BQ9NW08 1133 aaPredicted RBP17.74■□□□□ 0.43
HDAC11-202ENST00000402259 DTLQ9NZJ0 730 aa17.74■□□□□ 0.43
HDAC11-202ENST00000402259 UBA2Q9UBT2 640 aaPredicted RBP17.74■□□□□ 0.43
HDAC11-202ENST00000402259 PACSIN2Q9UNF0 486 aaPredicted RBP17.74■□□□□ 0.43
HDAC11-202ENST00000402259 TCRBV21S2A2A0A5A6 115 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 SMAD6O43541 496 aaKnown RBP17.73■□□□□ 0.43
HDAC11-202ENST00000402259 MAFKO60675 156 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 CST8O60676 142 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 SIN3BO75182 1162 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 TGM2P21980 687 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 MSNP26038 577 aaKnown RBP17.73■□□□□ 0.43
HDAC11-202ENST00000402259 GARSP41250 739 aaKnown RBP17.73■□□□□ 0.43
HDAC11-202ENST00000402259 NR2C2P49116 596 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 GBE1Q04446 702 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 ZNF33AQ06730 810 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 ELAVL3Q14576 367 aaKnown RBP17.73■□□□□ 0.43
HDAC11-202ENST00000402259 RPS6KA1Q15418 735 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 ACCSLQ4AC99 568 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 BBS12Q6ZW61 710 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 ATPAF2Q8N5M1 289 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 ZNF366Q8N895 744 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 OSBPL8Q9BZF1 889 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 BRD8Q9H0E9 1235 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 IRF2BPLQ9H1B7 796 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 TRMT1Q9NXH9 659 aaKnown RBP17.73■□□□□ 0.43
HDAC11-202ENST00000402259 CACNA1HO95180 2353 aa17.73■□□□□ 0.43
HDAC11-202ENST00000402259 SHROOM3Q8TF72 1996 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 J3KR12 359 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 K7ERQ8 282 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 KIF5CO60282 957 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 GSRP00390 522 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms