RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 KIRREL3Q8IZU9 778 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MICAL1Q8TDZ2 1067 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 LRRN4Q8WUT4 740 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 HTR3CQ8WXA8 447 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 DTLQ9NZJ0 730 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 HBS1LQ9Y450 684 aaKnown RBP16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 USP3Q9Y6I4 520 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 TMEM265A0A087WTH1 108 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CCDC195A0A1B0GUA6 201 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 HIDE1A8MVS5 230 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CLDN5O00501 218 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MAGEC1O60732 1142 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 IRS1P35568 1242 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ARL4AP40617 200 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 RAP1GDS1P52306 607 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 STX3Q13277 289 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 KPNB1Q14974 876 aaKnown RBP16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CCDC6Q16204 474 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 RNF19BQ6ZMZ0 732 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SPATA2LQ8IUW3 424 aaPredicted RBP16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CDKL2Q92772 493 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 HSFY1Q96LI6 401 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 KLHL5Q96PQ7 755 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 EMILIN2Q9BXX0 1053 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 DUSP16Q9BY84 665 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 THAP1Q9NVV9 213 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MAFFQ9ULX9 164 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PCDHB5Q9Y5E4 795 aa16.26■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SDR42E2A6NKP2 422 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SMNDC1O75940 238 aaKnown RBP eCLIP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 VNN2O95498 520 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ADORA2BP29275 332 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PGM1P36871 562 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 VHLP40337 213 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 RCN1Q15293 331 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 HSF5Q4G112 596 aaPredicted RBP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ACSBG2Q5FVE4 666 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PLPP4Q5VZY2 271 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 LRRC8BQ6P9F7 803 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 DENND5BQ6ZUT9 1274 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 FAM35AQ86V20 835 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 TMPRSS6Q8IU80 811 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CCDC185Q8N715 623 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SPPL2BQ8TCT7 592 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CLEC4CQ8WTT0 213 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 DNAJC9Q8WXX5 260 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 STMN2Q93045 179 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SMARCD1Q96GM5 515 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 FERMT1Q9BQL6 677 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 NAT9Q9BTE0 207 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MED10Q9BTT4 135 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CSNK1G1Q9HCP0 422 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ARMCX1Q9P291 453 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CORO1CQ9ULV4 474 aaPredicted RBP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MTMR11A4FU01 709 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 NVLO15381 856 aaKnown RBP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 OPHN1O60890 802 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PSMG1O95456 288 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 C1RP00736 705 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ADH1AP07327 375 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 LCP1P13796 627 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 VAV1P15498 845 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 AMPD1P23109 780 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CA8P35219 290 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ABL2P42684 1182 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ATXN1P54253 815 aaKnown RBP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 AQP5P55064 265 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 NIPAL4Q0D2K0 466 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ZRSR2Q15696 482 aaKnown RBP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 EFHC1Q5JVL4 640 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CES4AQ5XG92 561 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ATAD1Q8NBU5 361 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 GDPD5Q8WTR4 605 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PGLYRP2Q96PD5 576 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 TRIM56Q9BRZ2 755 aaKnown RBP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 AFF4Q9UHB7 1163 aaKnown RBP16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 TAGLN3Q9UI15 199 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SORCS3Q9UPU3 1222 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 TRANK1O15050 2925 aa16.25■□□□□ 0.19
CHRFAM7A-203ENST00000401522 B2RBV5 119 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SPECC1L-ADORA2AF8WAN1 911 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 GLRA3O75311 464 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ZNF189O75820 626 aaPredicted RBP16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 FAM200BP0CF97 657 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 NPR3P17342 541 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PGAM1P18669 254 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 BDNFP23560 247 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 GRIA1P42261 906 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MATKP42679 507 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MAGEA11P43364 429 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SLC34A1Q06495 639 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MUM1Q2TAK8 710 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 DNAL1Q4LDG9 190 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CLEC20AQ6ZU45 233 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms