RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 MAGEA10P43363 369 aaPredicted RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 PHKA2P46019 1235 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 BACE1P56817 501 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 IFRD2Q12894 506 aaPredicted RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 KIZQ2M2Z5 673 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 TREML2Q5T2D2 321 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 CYP2R1Q6VVX0 501 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 FAM131BQ86XD5 332 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 TP53INP2Q8IXH6 220 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 ZNF567Q8N184 647 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 BBS5Q8N3I7 341 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 GFM2Q969S9 779 aaKnown RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 MFSD3Q96ES6 412 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 TEPSINQ96N21 525 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 DCUN1D5Q9BTE7 237 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 UNKQ9C0B0 810 aaKnown RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 EIF2B3Q9NR50 452 aaKnown RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 OLAHQ9NV23 265 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 EBF1Q9UH73 591 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 CNOT11Q9UKZ1 510 aaKnown RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 PHGDHO43175 533 aaKnown RBP14.21□□□□□ -0.13
APOB-202ENST00000399256 H2AFYO75367 372 aaKnown RBP14.21□□□□□ -0.13
APOB-202ENST00000399256 ARSAP15289 507 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 CLCN3P51790 818 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 PRAMEP78395 509 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 NSUN2Q08J23 767 aaKnown RBP eCLIP14.21□□□□□ -0.13
APOB-202ENST00000399256 CBX3Q13185 183 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 LIPMQ5VYY2 423 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 OSBPL11Q9BXB4 747 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 FZD8Q9H461 694 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 RNF181Q9P0P0 153 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 FIS1Q9Y3D6 152 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 ZNF487B1APH4 448 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 C9IYK1 514 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 E7ENX8 843 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 KCNK1O00180 336 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 COQ9O75208 318 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 TADA2AO75478 443 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 TOMM70O94826 608 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 TFPTP0C1Z6 253 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 FAM163BP0C2L3 166 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 LCP1P13796 627 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 ATICP31939 592 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 ARL4AP40617 200 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 PSME3P61289 254 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 INCA1Q0VD86 236 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 SFSWAPQ12872 951 aaKnown RBP14.21□□□□□ -0.13
APOB-202ENST00000399256 DPYSQ14117 519 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 SOWAHAQ2M3V2 549 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 PID1Q7Z2X4 250 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 CLVS1Q8IUQ0 354 aaPredicted RBP14.21□□□□□ -0.13
APOB-202ENST00000399256 DNAAF3Q8N9W5 541 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 SMYD1Q8NB12 490 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 LRRC40Q9H9A6 602 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 IARS2Q9NSE4 1012 aaKnown RBP14.21□□□□□ -0.13
APOB-202ENST00000399256 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 BLOC1S6Q9UL45 172 aa14.21□□□□□ -0.13
APOB-202ENST00000399256 SYNJ2BP-COX16A0A087WUM0 186 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 SBK3P0C264 359 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 PRKAA1Q13131 559 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 PDAP1Q13442 181 aaKnown RBP14.21□□□□□ -0.14
APOB-202ENST00000399256 HERC3Q15034 1050 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 LY6KQ17RY6 165 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 ANKDD1AQ495B1 522 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 GLRA4Q5JXX5 417 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 ZYG11AQ6WRX3 759 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 HERC6Q8IVU3 1022 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 CPNE9Q8IYJ1 553 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 CCNYL1Q8N7R7 359 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 ASB9Q96DX5 294 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 CPB2Q96IY4 423 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 APOL2Q9BQE5 337 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 MRPL45Q9BRJ2 306 aaKnown RBP14.21□□□□□ -0.14
APOB-202ENST00000399256 NOL11Q9H8H0 719 aaKnown RBP14.21□□□□□ -0.14
APOB-202ENST00000399256 PNPLA3Q9NST1 481 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 FAIMQ9NVQ4 179 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 COX16Q9P0S2 106 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 USP3Q9Y6I4 520 aa14.21□□□□□ -0.14
APOB-202ENST00000399256 HACD1B0YJ81 288 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 ZBTB42B2RXF5 422 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 TMX2-CTNND1H3BSU7 103 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 CKMT2P17540 419 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 HDCP19113 662 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 MBTD1Q05BQ5 628 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 MPP3Q13368 585 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 PATL1Q86TB9 770 aaKnown RBP14.2□□□□□ -0.14
APOB-202ENST00000399256 TMEM110Q86TL2 294 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 LSMEM2Q8N112 164 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 VPS39Q96JC1 886 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 BIRC8Q96P09 236 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 APBA2Q99767 749 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 PLGRKTQ9HBL7 147 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 SH3GLB1Q9Y371 365 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 PCDHGA7Q9Y5G6 932 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 ZCWPW2A0A1B0GU75 182 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms