RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 IL1BP01584 269 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 GOT1P17174 413 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 SLC9A1P19634 815 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 C5AR1P21730 350 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 CD38P28907 300 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 METAP1P53582 386 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 ADPRHP54922 357 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 MARSP56192 900 aaKnown RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 PPP2CBP62714 309 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 PPP2CAP67775 309 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 CDK17Q00537 523 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 CYP4F3Q08477 520 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 PDCLQ13371 301 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 EIF4EBP2Q13542 120 aaPredicted RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 TLR1Q15399 786 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 SHBQ15464 509 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 COL28A1Q2UY09 1125 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 POM121L1PQ3SYA9 428 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 DHRS13Q6UX07 377 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 DEFB106AQ8N104 65 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 CCAR2Q8N163 923 aaKnown RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 WDTC1Q8N5D0 677 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 RNF34Q969K3 372 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 SERAC1Q96JX3 654 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 CALR3Q96L12 384 aaKnown RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 CPXM1Q96SM3 734 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 ELF4Q99607 663 aaPredicted RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 PRMT1Q99873 361 aaKnown RBP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 TRIM62Q9BVG3 475 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 DDIT4Q9NX09 232 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 FTSJ1Q9UET6 329 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 SLC12A6Q9UHW9 1150 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 FZD4Q9ULV1 537 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 PCDHGA11Q9Y5H2 935 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 HRH3Q9Y5N1 445 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 GTF3C3Q9Y5Q9 886 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3DA0A087WVF3 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3IA0A087WXS9 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3EA0A087X179 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3KA0A087X1G2 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3FA6NER0 549 aaPredicted RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TMEM229AB2RXF0 380 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3LB9A6J9 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 ATP9BO43861 1147 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 DFNA5O60443 496 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 FGFR1OPO95684 399 aaKnown RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3HP0C7X1 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 ABCB4P21439 1286 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 MAT2AP31153 395 aaKnown RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 DRD3P35462 400 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 NNMTP40261 264 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 IRAK1P51617 712 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 CCR5P51681 352 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 CLDN6P56747 220 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 DNAJC3Q13217 504 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 MEA1Q16626 185 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 INAVAQ3KP66 663 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 ACCSLQ4AC99 568 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3GQ6DHY5 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 OR6B2Q6IFH4 312 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3CQ6IPX1 549 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 CXorf57Q6NSI4 855 aaKnown RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 FBXL22Q6P050 247 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TRIM65Q6PJ69 517 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 ENOSF1Q7L5Y1 443 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 C14orf80Q86SX3 495 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 TBC1D3Q8IZP1 549 aaPredicted RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 VWA5B2Q8N398 1253 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 GALNT15Q8N3T1 639 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 OR52K2Q8NGK3 314 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 FRS2Q8WU20 508 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 SKA1Q96BD8 255 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 PPP1R13BQ96KQ4 1090 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 RPRD1AQ96P16 312 aaPredicted RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 SLC2A13Q96QE2 648 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 AJAP1Q9UKB5 411 aaPredicted RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 SARDHQ9UL12 918 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 VANGL2Q9ULK5 521 aa10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 COL5A1P20908 1838 aaPredicted RBP10.09□□□□□ -0.79
NIFKP1-201ENST00000398317 DOCK4Q8N1I0 1966 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 TRPM6Q9BX84 2022 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 A0A1B0GVM2 712 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 FAM170AA1A519 330 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 TCAF2A6NFQ2 919 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 C10orf142B7Z368 130 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 TLR4O00206 839 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 ENC1O14682 589 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 BNIP3LO60238 219 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 RTN2O75298 545 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 LDOC1O95751 146 aaPredicted RBP10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 ITGAVP06756 1048 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 CCR1P32246 355 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 PLK1P53350 603 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 SULT2A1Q06520 285 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 BNIP3Q12983 259 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms