RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 RPL10LQ96L21 214 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 QKIQ96PU8 341 aaKnown RBP eCLIP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 PDFQ9HBH1 243 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 HOMER3Q9NSC5 361 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 UBA2Q9UBT2 640 aaPredicted RBP24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 DNPEPQ9ULA0 475 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 PLA2G4CQ9UP65 541 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 ACTL7AQ9Y615 435 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 F5P12259 2224 aa24.08■■□□□ 1.44
TSPAN4-203ENST00000397397 GOLGA6L10A0A0M3HER8 536 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 LIASO43766 372 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 GEMIN4P57678 1058 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 SLC20A2Q08357 652 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 SNX1Q13596 522 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 TUBB2AQ13885 445 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 PRKD1Q15139 912 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 SLC45A4Q5BKX6 768 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 CDKL3Q8IVW4 592 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 SLC35B2Q8TB61 432 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 NSMCE1Q8WV22 266 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 EDAQ92838 391 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 LRFN3Q9BTN0 628 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 TUBB2BQ9BVA1 445 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 C10orf88Q9H8K7 445 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 STARD13Q9Y3M8 1113 aa24.07■■□□□ 1.44
TSPAN4-203ENST00000397397 KANSL1LA0AUZ9 987 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 ANTXRLA6NF34 631 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 GPR37L1O60883 481 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 MT-CO1P00395 513 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 SRPRAP08240 638 aaKnown RBP24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 ZNF33AQ06730 810 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 UBXN2BQ14CS0 331 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 TMEM31Q5JXX7 168 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 EMC10Q5UCC4 262 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 EGFLAMQ63HQ2 1017 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 ATP11CQ8NB49 1132 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 MRGPRX3Q96LB0 322 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 ZNF599Q96NL3 588 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 TBC1D17Q9HA65 648 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 LTB4R2Q9NPC1 389 aa24.06■■□□□ 1.44
TSPAN4-203ENST00000397397 CXorf51AA0A1B0GTR3 108 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 STK25O00506 426 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 MATN3O15232 486 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 CD160O95971 181 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 VAV1P15498 845 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 TARSP26639 723 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 TIE1P35590 1138 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 SERPINH1P50454 418 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 ST8SIA6P61647 398 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 SIGLEC14Q08ET2 396 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 BYSLQ13895 437 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 CCINQ13939 588 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 E2F5Q15329 346 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 PTPRNQ16849 979 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 WHAMMP3Q1A5X7 153 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 FBXO43Q4G163 708 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 FNDC3BQ53EP0 1204 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 SEPT10Q9P0V9 454 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 THAP10Q9P2Z0 257 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 SLCO3A1Q9UIG8 710 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 HCN2Q9UL51 889 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 HS3ST2Q9Y278 367 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 MRFAP1Q9Y605 127 aa24.05■■□□□ 1.44
TSPAN4-203ENST00000397397 RBL1P28749 1068 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 NNMTP40261 264 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 KIR2DL1P43626 348 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 CLCN6P51797 869 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 CKAP4Q07065 602 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 LBRQ14739 615 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 TMCO4Q5TGY1 634 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 HEATR6Q6AI08 1181 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 SH2D3CQ8N5H7 860 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 ZNF513Q8N8E2 541 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 USP33Q8TEY7 942 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 FATE1Q969F0 183 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 NKD2Q969F2 451 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 MAGOHBQ96A72 148 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 NELL2Q99435 816 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 FOXQ1Q9C009 403 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 ZDHHC4Q9NPG8 344 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 RBM12Q9NTZ6 932 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 ZNF148Q9UQR1 794 aa24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 MTF2Q9Y483 593 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-203ENST00000397397 BCLAF3A2AJT9 711 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 FAM170BA6NMN3 283 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 K7ERQ8 282 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 KCNK1O00180 336 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 PEX11BO96011 259 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 SRCP12931 536 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 CCNB1P14635 433 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 HNRNPLP14866 589 aaKnown RBP eCLIP24.03■■□□□ 1.445e-7■□□□□ 11.2
TSPAN4-203ENST00000397397 LRRC32Q14392 662 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 ZNF234Q14588 700 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 RFTN1Q14699 578 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 OASLQ15646 514 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 CYP1B1Q16678 543 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 ACCSLQ4AC99 568 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 INO80DQ53TQ3 878 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 C2orf27AQ580R0 203 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 DGKKQ5KSL6 1271 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms