RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 CD160O95971 181 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 MARCKSL1P49006 195 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 PAPOLAP51003 745 aaKnown RBP16.47■□□□□ 0.23
RBM39-205ENST00000397370 CLCN6P51797 869 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 DLG2Q15700 870 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 ODF2Q5BJF6 829 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 C9orf64Q5T6V5 341 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 NT5DC3Q86UY8 548 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 WDR5BQ86VZ2 330 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 LONP2Q86WA8 852 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 TP53INP2Q8IXH6 220 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 KATNAL2Q8IYT4 538 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 SYCE1Q8N0S2 351 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 PQLC3Q8N755 202 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 ZBTB44Q8NCP5 570 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 OR2T3Q8NH03 318 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 HMGB4Q8WW32 186 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 KRT35Q92764 455 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 PTPRN2Q92932 1015 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 RNF157Q96PX1 679 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 BCCIPQ9P287 314 aaKnown RBP eCLIP16.47■□□□□ 0.23
RBM39-205ENST00000397370 PPP2R2CQ9Y2T4 447 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
RBM39-205ENST00000397370 ACTL7AQ9Y615 435 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 CAPN6Q9Y6Q1 641 aa16.47■□□□□ 0.23
RBM39-205ENST00000397370 SMAD6O43541 496 aaKnown RBP16.46■□□□□ 0.23
RBM39-205ENST00000397370 VAV1P15498 845 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 NDUFV2P19404 249 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 CTNNA2P26232 953 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
RBM39-205ENST00000397370 SERPINB6P35237 376 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 SERPINH1P50454 418 aaKnown RBP16.46■□□□□ 0.23
RBM39-205ENST00000397370 COPAP53621 1224 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 GEMIN4P57678 1058 aaKnown RBP16.46■□□□□ 0.23
RBM39-205ENST00000397370 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 PAFAH1B3Q15102 231 aaKnown RBP16.46■□□□□ 0.23
RBM39-205ENST00000397370 NCBP2-AS2Q69YL0 99 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 MFSD7Q6UXD7 560 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 PGBD3Q8N328 593 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 MRGPRX1Q96LB2 322 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 TPSD1Q9BZJ3 242 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 MKRN2Q9H000 416 aaKnown RBP16.46■□□□□ 0.23
RBM39-205ENST00000397370 SLC6A17Q9H1V8 727 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 FBRSQ9HAH7 460 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 LZTFL1Q9NQ48 299 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 AMFRQ9UKV5 643 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 PCDHGA2Q9Y5H1 932 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 PCDHA3Q9Y5H8 950 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 PLXND1Q9Y4D7 1925 aa16.46■□□□□ 0.23
RBM39-205ENST00000397370 WDFY4Q6ZS81 3184 aa16.46■□□□□ 0.22
RBM39-205ENST00000397370 CCDC66A2RUB6 948 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 DFFAO00273 331 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 TAZQ16635 292 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 C22orf39Q6P5X5 142 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 LEKR1Q6ZMV7 388 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 Q6ZVU0 165 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 PEX26Q7Z412 305 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 TMPRSS6Q8IU80 811 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 RCOR2Q8IZ40 523 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 ATOH1Q92858 354 aaPredicted RBP16.45■□□□□ 0.22
RBM39-205ENST00000397370 CEP44Q9C0F1 390 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 PRDM16Q9HAZ2 1276 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 PDFQ9HBH1 243 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 CACNA1HO95180 2353 aa16.45■□□□□ 0.22
RBM39-205ENST00000397370 J3KR12 359 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 MFSD11O43934 449 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 PRAMEF11O60813 436 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 LILRB5O75023 590 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 ZNF821O75541 412 aaPredicted RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.22
RBM39-205ENST00000397370 FTCDO95954 541 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 C7P10643 843 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 CDKN2BP42772 138 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 PEX5P50542 639 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 IL10RBQ08334 325 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 SLC9A4Q6AI14 798 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 ZC3H14Q6PJT7 736 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 KIAA1324Q6UXG2 1013 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 SPOCD1Q6ZMY3 1216 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 ARHGAP36Q6ZRI8 547 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 METTL3Q86U44 580 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 RFX6Q8HWS3 928 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 STK40Q8N2I9 435 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 PCDH20Q8N6Y1 951 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 EXD1Q8NHP7 514 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 RBM41Q96IZ5 413 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 FAM129BQ96TA1 746 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 MAK16Q9BXY0 300 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 RSPH9Q9H1X1 276 aaPredicted RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 SP110Q9HB58 689 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 IPO11Q9UI26 975 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 FCF1Q9Y324 198 aaKnown RBP16.44■□□□□ 0.22
RBM39-205ENST00000397370 R4GN57 208 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 MUC6Q6W4X9 2439 aa16.44■□□□□ 0.22
RBM39-205ENST00000397370 APOL1O14791 398 aa16.43■□□□□ 0.22
RBM39-205ENST00000397370 BNIP3LO60238 219 aa16.43■□□□□ 0.22
RBM39-205ENST00000397370 CNR2P34972 360 aa16.43■□□□□ 0.22
RBM39-205ENST00000397370 RPS14P62263 151 aaKnown RBP16.43■□□□□ 0.22
RBM39-205ENST00000397370 GBE1Q04446 702 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms