RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ETFBP38117 255 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 SLC18A1P54219 525 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 TRIM32Q13049 653 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 DNAL1Q4LDG9 190 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 C6orf52Q5T4I8 152 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 ARHGAP17Q68EM7 881 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 TWF2Q6IBS0 349 aaKnown RBP9.46□□□□□ -0.89
NDE1-201ENST00000396354 ZNF398Q8TD17 642 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 LPPQ93052 612 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 PPWD1Q96BP3 646 aaKnown RBP9.46□□□□□ -0.89
NDE1-201ENST00000396354 CERS2Q96G23 380 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 C7orf26Q96N11 449 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 SLC39A3Q9BRY0 314 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 TUBB6Q9BUF5 446 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 PIGVQ9NUD9 493 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 ZNF212Q9UDV6 495 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 VANGL2Q9ULK5 521 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 SH3BP1Q9Y3L3 701 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 A0A0A0MRY4 1105 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 SPAG6O75602 509 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 VAPBO95292 243 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 PIGNO95427 931 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 PRKCHP24723 683 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 RANBP1P43487 201 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 APLP1P51693 650 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 ABCE1P61221 599 aaKnown RBP9.46□□□□□ -0.89
NDE1-201ENST00000396354 PRAMEP78395 509 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 ITGA7Q13683 1181 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 CCNIQ14094 377 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 FLOT2Q14254 428 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 KRT72Q14CN4 511 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 CNGA3Q16281 694 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 DEFB115Q30KQ5 88 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 HABP4Q5JVS0 413 aaKnown RBP9.46□□□□□ -0.89
NDE1-201ENST00000396354 SLC41A1Q8IVJ1 513 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 ICA1LQ8NDH6 482 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 RPL10LQ96L21 214 aaKnown RBP9.46□□□□□ -0.89
NDE1-201ENST00000396354 SPATA13Q96N96 652 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 SH3GL3Q99963 347 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 TLE6Q9H808 572 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 PPCSQ9HAB8 311 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 S100A14Q9HCY8 104 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 MIOSQ9NXC5 875 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 EFR3BQ9Y2G0 817 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 CDH23Q9H251 3354 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 FAM159BA6NKW6 160 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 GLRA3O75311 464 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 SERPINE1P05121 402 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 C2P06681 752 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 NFKB1P19838 968 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 ITGAXP20702 1163 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 NMBRP28336 390 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 MPP1Q00013 466 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 CRHR2Q13324 411 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 ART3Q13508 389 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 FBXO47Q5MNV8 452 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 WSCD1Q658N2 575 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 ARHGAP36Q6ZRI8 547 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 LIMS2Q7Z4I7 341 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 PRPF18Q99633 342 aaKnown RBP9.46□□□□□ -0.9
NDE1-201ENST00000396354 PCDHAC1Q9H158 963 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 SSU72Q9NP77 194 aaKnown RBP9.46□□□□□ -0.9
NDE1-201ENST00000396354 TCF7L2Q9NQB0 619 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 GMPR2Q9P2T1 348 aaKnown RBP9.46□□□□□ -0.9
NDE1-201ENST00000396354 TLK1Q9UKI8 766 aa9.46□□□□□ -0.9
NDE1-201ENST00000396354 RUVBL2Q9Y230 463 aaKnown RBP9.46□□□□□ -0.9
NDE1-201ENST00000396354 MTF2Q9Y483 593 aaPredicted RBP9.46□□□□□ -0.9
NDE1-201ENST00000396354 HEMK1Q9Y5R4 338 aaPredicted RBP9.46□□□□□ -0.9
NDE1-201ENST00000396354 KPNA7A9QM74 516 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 NDC80O14777 642 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 NRP1O14786 923 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 TSPAN3O60637 253 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 TGDSO95455 350 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 COX4I1P13073 169 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 ERCC2P18074 760 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 XRCC1P18887 633 aaPredicted RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 MX2P20592 715 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 PMLP29590 882 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 ARL1P40616 181 aaPredicted RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 CASP2P42575 452 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 CHRNA4P43681 627 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 TKTL1P51854 596 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 LILRA4P59901 499 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 TPI1P60174 286 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 XKR4Q5GH76 650 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 GPRIN1Q7Z2K8 1008 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 BHLHE22Q8NFJ8 381 aaPredicted RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 CEP70Q8NHQ1 597 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 LRGUKQ96M69 825 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 TSNARE1Q96NA8 513 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 SORT1Q99523 831 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 ULBP1Q9BZM6 244 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 PIF1Q9H611 641 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 PLEKHA5Q9HAU0 1116 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 BFARQ9NZS9 450 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 TTC3P53804 2025 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 GOLGA4Q13439 2230 aaKnown RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 BCLAF3A2AJT9 711 aaKnown RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 GOLGA8CPA6NN73 597 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 YJEFN3A6XGL0 299 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms