RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PRNPP04156 253 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 MAT2AP31153 395 aaKnown RBP17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 CHRNA3P32297 505 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 APBA1Q02410 837 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 PROX2Q3B8N5 592 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 SLC25A52Q3SY17 297 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 HES3Q5TGS1 186 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 ZNF783Q6ZMS7 281 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 ARCQ7LC44 396 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 SLC47A2Q86VL8 602 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 TMEM35BQ8NCS4 154 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 IFT43Q96FT9 208 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 KLHDC7BQ96G42 594 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 PSMB7Q99436 277 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 HDAC8Q9BY41 377 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 TKTL2Q9H0I9 626 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 KLHL11Q9NVR0 708 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 DNAJC12Q9UKB3 198 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 CNTN5O94779 1100 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 ADCY5O95622 1261 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 MT-CO1P00395 513 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 CTSLP07711 333 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 RHOCP08134 193 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 E2F1Q01094 437 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 SLC20A2Q08357 652 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 TARDBPQ13148 414 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 MAN2A1Q16706 1144 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 LRRC31Q6UY01 552 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 CREBRFQ8IUR6 639 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 ATP11CQ8NB49 1132 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 LRIG1Q96JA1 1093 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 SIK2Q9H0K1 926 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 VPS51Q9UID3 782 aa17.91■□□□□ 0.46
SNRPA1-202ENST00000394082 BPTFQ12830 3046 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 ILVBLA1L0T0 632 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 I6L893 689 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 EIF2S3P41091 472 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 NUMBP49757 651 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 UBE2HP62256 183 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 ZNF284Q2VY69 593 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 ALFQ53S48 1182 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 DPY19L2P1Q6NXN4 242 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 BNIPLQ7Z465 357 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 ZSCAN30Q86W11 494 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 HORMAD1Q86X24 394 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 DCP2Q8IU60 420 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 FAM114A1Q8IWE2 563 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 DCBLD1Q8N8Z6 715 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 C18orf8Q96DM3 657 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 HAPLN3Q96S86 360 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 CEP44Q9C0F1 390 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 RETREG1Q9H6L5 497 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 ANLNQ9NQW6 1124 aa17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 AJAP1Q9UKB5 411 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-202ENST00000394082 A0A1W2PQU0 124 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 LSM8O95777 96 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 THEGLP0DJG4 465 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 CYP11B1P15538 503 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 HNRNPA2B1P22626 353 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 AKT2P31751 481 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 GGCXP38435 758 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 ABCG1P45844 678 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 DEUP1Q05D60 604 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 KCNMA1Q12791 1236 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 ARTNQ5T4W7 220 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 ERN2Q76MJ5 926 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 ABI3BPQ7Z7G0 1075 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 SLC25A45Q8N413 288 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 OR4C6Q8NH72 309 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 SNIP1Q8TAD8 396 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 PPP1R16AQ96I34 528 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 NDST4Q9H3R1 872 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 DYRK4Q9NR20 520 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 ZNF212Q9UDV6 495 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 CLCA2Q9UQC9 943 aa17.89■□□□□ 0.45
SNRPA1-202ENST00000394082 DOCK9Q9BZ29 2069 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 A0A0D9SEW6 157 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 KPNA3O00505 521 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 RIOK3O14730 519 aaKnown RBP17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 SNAP91O60641 907 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 TFE3P19532 575 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 DGKAP23743 735 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 OR1E1P30953 314 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 RECQLP46063 649 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 SULT1E1P49888 294 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 POM121L1PQ3SYA9 428 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 TMEM259Q4ZIN3 620 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 VWA3BQ502W6 1294 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 HS1BP3Q53T59 392 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 RETSATQ6NUM9 610 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 C22orf39Q6P5X5 142 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 XYLT1Q86Y38 959 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 PLPP6Q8IY26 295 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 GPR27Q9NS67 375 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 PPARGC1AQ9UBK2 798 aaKnown RBP17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 IL36AQ9UHA7 158 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 HS3ST3A1Q9Y663 406 aa17.88■□□□□ 0.45
SNRPA1-202ENST00000394082 K7ERQ8 282 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms