RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 RTN3O95197 1032 aaPredicted RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 TPH1P17752 444 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 DNAJB1P25685 340 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 NMBRP28336 390 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 POLD2P49005 469 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 PAPOLAP51003 745 aaKnown RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 PCLAFQ15004 111 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 PIK3R6Q5UE93 754 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 ZNF280DQ6N043 979 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 CLEC14AQ86T13 490 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 LCA5Q86VQ0 697 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 CNTN4Q8IWV2 1026 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 OR6Y1Q8NGX8 325 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 SPATA22Q8NHS9 363 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 PPP1R14CQ8TAE6 165 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 USP33Q8TEY7 942 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 ZNF419Q96HQ0 510 aaPredicted RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 TBC1D10AQ9BXI6 508 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 OXCT2Q9BYC2 517 aaPredicted RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 STN1Q9H668 368 aaKnown RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 HMX1Q9NP08 348 aaPredicted RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 NDFIP2Q9NV92 336 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 RBM22Q9NW64 420 aaKnown RBP eCLIP14.54□□□□□ -0.08
MKS1-203ENST00000393120 TMEM216Q9P0N5 145 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 COPG2Q9UBF2 871 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 NUDT5Q9UKK9 219 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 STK38LQ9Y2H1 464 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 IGLV3-10A0A075B6K4 115 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 CCDC195A0A1B0GUA6 201 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 FCHO1O14526 889 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 CALB2P22676 271 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 YWHAQP27348 245 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 GRK4P32298 578 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 GPR15P49685 360 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 USP46P62068 366 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 TNK2Q07912 1038 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 HNRNPDQ14103 355 aaKnown RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 TRIP4Q15650 581 aaPredicted RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 FAM171A1Q5VUB5 890 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 RANBP10Q6VN20 620 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 SPATA17Q96L03 361 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 CASD1Q96PB1 797 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 PGLYRP2Q96PD5 576 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 NOL6Q9H6R4 1146 aaKnown RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 ARNT2Q9HBZ2 717 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 FBXO6Q9NRD1 293 aaPredicted RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 ARL8BQ9NVJ2 186 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 TMEM248Q9NWD8 314 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 GMIPQ9P107 970 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 IPO11Q9UI26 975 aaKnown RBP14.54□□□□□ -0.08
MKS1-203ENST00000393120 PCDHB7Q9Y5E2 793 aa14.54□□□□□ -0.08
MKS1-203ENST00000393120 TBC1D4O60343 1298 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 SIN3BO75182 1162 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 PEX11BO96011 259 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 ALDH2P05091 517 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 INHAP05111 366 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 HLA-DQB2P05538 268 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 CCND1P24385 295 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 SLC1A6P48664 564 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 GPR17Q13304 367 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 MTA1Q13330 715 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 BFSP2Q13515 415 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 MS4A13Q5J8X5 152 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 WLSQ5T9L3 541 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 SDHAF4Q5VUM1 108 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 ABI1Q8IZP0 508 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 ATP6V0D2Q8N8Y2 350 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 PIWIL2Q8TC59 973 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 SPPL2BQ8TCT7 592 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 BTN2A3PQ96KV6 586 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 CAPNS2Q96L46 248 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 GPR22Q99680 433 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 ZYG11BQ9C0D3 744 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 RHOJQ9H4E5 214 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 FAM96AQ9H5X1 160 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 ZNF395Q9H8N7 513 aaPredicted RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 IARS2Q9NSE4 1012 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.53□□□□□ -0.08
MKS1-203ENST00000393120 MPP6Q9NZW5 540 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 SORCS3Q9UPU3 1222 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 ANKRD6Q9Y2G4 727 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 A0A096LPK6 155 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 NBNO60934 754 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 MOCS2O96007 188 aaPredicted RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 MT-CYBP00156 380 aaPredicted RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 CPA3P15088 417 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 HARS2P49590 506 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 RENBPP51606 427 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 PLXNA3P51805 1871 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 AQP5P55064 265 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 RPL10AP62906 217 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 ELAVL2Q12926 359 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 GPNMBQ14956 572 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 UGP2Q16851 508 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 CMC1Q7Z7K0 106 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 ZC3HC1Q86WB0 502 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 WDR75Q8IWA0 830 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 ATAD1Q8NBU5 361 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms