RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FAM207AQ9NSI2 230 aaPredicted RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 HS3ST2Q9Y278 367 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 ACTL7AQ9Y615 435 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 ANKRD11Q6UB99 2663 aaPredicted RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 NBEAQ8NFP9 2946 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 DRGXA6NNA5 263 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 TNFSF14O43557 240 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 LSM8O95777 96 aaKnown RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 CHRNB2P17787 502 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 SCNN1AP37088 669 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 NXPH1P58417 271 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 POLR2FP61218 127 aaKnown RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 MTA1Q13330 715 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 C15orf59Q2T9L4 293 aaPredicted RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 PIP5KL1Q5T9C9 394 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 CDKAL1Q5VV42 579 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 FAM46CQ5VWP2 391 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 NAPEPLDQ6IQ20 393 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 DHRS13Q6UX07 377 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 BNIPLQ7Z465 357 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 PROSER1Q86XN7 944 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 SLC30A5Q8TAD4 765 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 GRIN3AQ8TCU5 1115 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 ARRDC3Q96B67 414 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 PPP1R9BQ96SB3 815 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 MAGEB5Q9BZ81 275 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 GDF3Q9NR23 364 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 ZNF212Q9UDV6 495 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 FTSJ1Q9UET6 329 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 FAM208BQ5VWN6 2430 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 GOLGA4Q13439 2230 aaKnown RBP16.98■□□□□ 0.31
PTPRK-208ENST00000392449 IGLV3-10A0A075B6K4 115 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 C1QTNF3-AMACRE9PGA6 284 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 TLR4O00206 839 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 KPNA3O00505 521 aaPredicted RBP16.98■□□□□ 0.31
PTPRK-208ENST00000392449 F9P00740 461 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 PRLRP16471 622 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 OR1E1P30953 314 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 KRT83P78385 493 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 FMO1Q01740 532 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 BNIP3Q12983 259 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 DNAJC3Q13217 504 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 CDO1Q16878 200 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 SMYD5Q6GMV2 418 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 LRRC31Q6UY01 552 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 TMPRSS7Q7RTY8 843 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 DCAF4L2Q8NA75 395 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 ENOX1Q8TC92 643 aaKnown RBP16.98■□□□□ 0.31
PTPRK-208ENST00000392449 SAP25Q8TEE9 199 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 SPON2Q9BUD6 331 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 C2orf49Q9BVC5 232 aaPredicted RBP16.98■□□□□ 0.31
PTPRK-208ENST00000392449 FZD3Q9NPG1 666 aa16.98■□□□□ 0.31
PTPRK-208ENST00000392449 COL5A1P20908 1838 aaPredicted RBP16.97■□□□□ 0.31
PTPRK-208ENST00000392449 ALOX15BO15296 676 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 SLC7A4O43246 635 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 ITGAVP06756 1048 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 EPHA8P29322 1005 aaPredicted RBP16.97■□□□□ 0.31
PTPRK-208ENST00000392449 CHRNA3P32297 505 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 C22orf39Q6P5X5 142 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 SETD3Q86TU7 594 aaPredicted RBP16.97■□□□□ 0.31
PTPRK-208ENST00000392449 PRPF39Q86UA1 669 aaKnown RBP16.97■□□□□ 0.31
PTPRK-208ENST00000392449 DRC7Q8IY82 874 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 EID2Q8N6I1 236 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 JOSD2Q8TAC2 188 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 SKA1Q96BD8 255 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 C1orf74Q96LT6 269 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 C11orf70Q9BRQ4 267 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 FANCLQ9NW38 375 aa16.97■□□□□ 0.31
PTPRK-208ENST00000392449 ITPR1Q14643 2758 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 DFNA5O60443 496 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 RNGTTO60942 597 aaKnown RBP16.96■□□□□ 0.31
PTPRK-208ENST00000392449 SDC3O75056 442 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 ZNF821O75541 412 aaPredicted RBP16.96■□□□□ 0.31
PTPRK-208ENST00000392449 CYP1A1P04798 512 aaPredicted RBP16.96■□□□□ 0.31
PTPRK-208ENST00000392449 JAM2P57087 298 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 CDR2Q01850 454 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 ARSIQ5FYB1 569 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 C6orf118Q5T5N4 469 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 TRIM69Q86WT6 500 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 RXFP2Q8WXD0 754 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 PCDHB18PQ96TA0 734 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 NDFIP2Q9NV92 336 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 PAXBP1Q9Y5B6 917 aa16.96■□□□□ 0.31
PTPRK-208ENST00000392449 A0A1W2PQU0 124 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 SLC31A1O15431 190 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 ZMPSTE24O75844 475 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 MMP8P22894 467 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 SOX5P35711 763 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 ARF5P84085 180 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 INAVAQ3KP66 663 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 CCDC14Q49A88 953 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 DPY19L3Q6ZPD9 716 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 MFSD2AQ8NA29 543 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 MSANTD4Q8NCY6 345 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 CNDP2Q96KP4 475 aaKnown RBP16.95■□□□□ 0.3
PTPRK-208ENST00000392449 HAPLN3Q96S86 360 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 ZYG11BQ9C0D3 744 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 CCDC86Q9H6F5 360 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms