RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 VPS28Q9UK41 221 aa3.16□□□□□ -1.9
TRAJ40-201ENST00000390497 MYRFQ9Y2G1 1151 aa3.16□□□□□ -1.9
TRAJ40-201ENST00000390497 WNT6Q9Y6F9 365 aa3.16□□□□□ -1.9
TRAJ40-201ENST00000390497 PIAS3Q9Y6X2 628 aa3.16□□□□□ -1.9
TRAJ40-201ENST00000390497 PASKQ96RG2 1323 aa3.16□□□□□ -1.9
TRAJ40-201ENST00000390497 TEX13CA0A0J9YWL9 993 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 NPIPB15A6NHN6 443 aaPredicted RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 LRRC53A6NM62 1247 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MYO1GB0I1T2 1018 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 FOXN1O15353 648 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 PRPF4O43172 522 aaKnown RBP eCLIP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MSI1O43347 362 aaKnown RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CEP104O60308 925 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 PROP1O75360 226 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 IL1AP01583 271 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 EIF2S1P05198 315 aaKnown RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 GALTP07902 379 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CYP2D6P10635 497 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 TFEBP19484 476 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 TYK2P29597 1187 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 PSMB10P40306 273 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 RAD52P43351 418 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CPA2P48052 419 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SOX2P48431 317 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 HARS2P49590 506 aaKnown RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CLK3P49761 638 aaKnown RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CYP2J2P51589 502 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 RHAGQ02094 409 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 TDGQ13569 410 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 KPNB1Q14974 876 aaKnown RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 WTAPQ15007 396 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 TOMM20Q15388 145 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 EDRF1Q3B7T1 1238 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SLC9B1Q4ZJI4 515 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MFSD4BQ5TF39 518 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 NCAPH2Q6IBW4 605 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 NAPEPLDQ6IQ20 393 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 HMBOX1Q6NT76 420 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CDC73Q6P1J9 531 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CYP20A1Q6UW02 462 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 C16orf54Q6UWD8 224 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 C17orf99Q6UX52 265 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 ZNF813Q6ZN06 617 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 IKBIPQ70UQ0 350 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 RTL10Q7L3V2 364 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 KRT74Q7RTS7 529 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 PRRT2Q7Z6L0 340 aaPredicted RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 OR8H2Q8N162 312 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SCAIQ8N9R8 606 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SCFD2Q8WU76 684 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 HDAC7Q8WUI4 952 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 TMEM170AQ8WVE7 144 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 ZFPM2Q8WW38 1151 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 KLHL29Q96CT2 875 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 REPS1Q96D71 796 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 FEM1CQ96JP0 617 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CLMNQ96JQ2 1002 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 ASB2Q96Q27 587 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MPHOSPH8Q99549 860 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 NCAPGQ9BPX3 1015 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MACROD1Q9BQ69 325 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 ZNF747Q9BV97 191 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SLC25A18Q9H1K4 315 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SMARCAD1Q9H4L7 1026 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CPNE5Q9HCH3 593 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 Q9N2J8 555 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 ATP8A2Q9NTI2 1148 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SEPT11Q9NVA2 429 aaKnown RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 GRHL1Q9NZI5 618 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SH3BP4Q9P0V3 963 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 LIMA1Q9UHB6 759 aaKnown RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 CDH22Q9UJ99 828 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 TLK1Q9UKI8 766 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 SLC8A2Q9UPR5 921 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 TMEM5Q9Y2B1 443 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 PCDHGB5Q9Y5G0 923 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 KCNE2Q9Y6J6 123 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 MST1RQ04912 1400 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 UTYO14607 1347 aa3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 ZNF335Q9H4Z2 1342 aaPredicted RBP3.15□□□□□ -1.91
TRAJ40-201ENST00000390497 A0A1W2PRG0 241 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 DPPA5A6NC42 116 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 SYNDIG1LA6NDD5 238 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 LIPT2A6NK58 231 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 EIF3CLB5ME19 914 aaKnown RBP3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 FAM157AC9JC47 383 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 PTGES3LE9PB15 166 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 TAF4O00268 1085 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 INPPL1O15357 1258 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 RNMTO43148 476 aaKnown RBP3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 PLOD3O60568 738 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 CBX6O95503 412 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 NFATC1O95644 943 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 PTPN2P17706 415 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 TUBA4AP68366 448 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 OLR1P78380 273 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 EPS8Q12929 822 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 CHAF1BQ13112 559 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms