RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CINPQ9BW66 212 aaPredicted RBP19.18■□□□□ 0.66
CSPG5-202ENST00000383738 PCDH9Q9HC56 1237 aa19.18■□□□□ 0.66
CSPG5-202ENST00000383738 ARHGEF38Q9NXL2 777 aa19.18■□□□□ 0.66
CSPG5-202ENST00000383738 F5P12259 2224 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 CACNA1SQ13698 1873 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 LIASO43766 372 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 ERCC2P18074 760 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 MGAT1P26572 445 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 MGAT5Q09328 741 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 TRIM16LQ309B1 348 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 FIZ1Q96SL8 496 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 TM6SF2Q9BZW4 377 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 FLRT1Q9NZU1 646 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 VCLP18206 1134 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 EIF2B2P49770 351 aaKnown RBP19.17■□□□□ 0.66
CSPG5-202ENST00000383738 DMPKQ09013 629 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 ELAVL2Q12926 359 aaKnown RBP19.17■□□□□ 0.66
CSPG5-202ENST00000383738 CDC16Q13042 620 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 CORO1BQ9BR76 489 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 KLHL25Q9H0H3 589 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 IARS2Q9NSE4 1012 aaKnown RBP19.17■□□□□ 0.66
CSPG5-202ENST00000383738 DDX28Q9NUL7 540 aaKnown RBP19.17■□□□□ 0.66
CSPG5-202ENST00000383738 COMMD3-BMI1R4GMX3 469 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 COL4A1P02462 1669 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 NWD2Q9ULI1 1742 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 SYCE1LA8MT33 242 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 RHOCP08134 193 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 GATMP50440 423 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 PDAP1Q13442 181 aaKnown RBP19.17■□□□□ 0.66
CSPG5-202ENST00000383738 SOWAHAQ2M3V2 549 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 TMTC4Q5T4D3 741 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 ELMSAN1Q6PJG2 1045 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 BNC2Q6ZN30 1099 aaPredicted RBP19.17■□□□□ 0.66
CSPG5-202ENST00000383738 GPR141Q7Z602 305 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 AMIGO2Q86SJ2 522 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 RMI1Q9H9A7 625 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 AGO3Q9H9G7 860 aaKnown RBP19.17■□□□□ 0.66
CSPG5-202ENST00000383738 PALMDQ9NP74 551 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 GIT1Q9Y2X7 761 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 SLC30A1Q9Y6M5 507 aa19.17■□□□□ 0.66
CSPG5-202ENST00000383738 NDUFS3O75489 264 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 TMEM40Q8WWA1 233 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 NRBF2Q96F24 287 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 MS4A4AQ96JQ5 239 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 LIN28AQ9H9Z2 209 aaKnown RBP19.16■□□□□ 0.66
CSPG5-202ENST00000383738 UTP6Q9NYH9 597 aaKnown RBP19.16■□□□□ 0.66
CSPG5-202ENST00000383738 WDR27A2RRH5 827 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 PARNO95453 639 aaKnown RBP19.16■□□□□ 0.66
CSPG5-202ENST00000383738 SELPP16109 830 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 CHRM3P20309 590 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 TCEA2Q15560 299 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 ZBTB49Q6ZSB9 765 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 DDIASQ8IXT1 998 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 KLHL23Q8NBE8 558 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 GTF2IRD1Q9UHL9 959 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 FARP1Q9Y4F1 1045 aaPredicted RBP19.16■□□□□ 0.66
CSPG5-202ENST00000383738 RAMP2O60895 175 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 E2F6O75461 281 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 WFS1O76024 890 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 TAF10Q12962 218 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 MFSD4BQ5TF39 518 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 DENND1CQ8IV53 801 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 KATNAL2Q8IYT4 538 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 HS6ST3Q8IZP7 471 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 TMEM86AQ8N2M4 240 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 ZNF296Q8WUU4 475 aaPredicted RBP19.16■□□□□ 0.66
CSPG5-202ENST00000383738 C10orf82Q8WW14 230 aa19.16■□□□□ 0.66
CSPG5-202ENST00000383738 TNRC6CQ9HCJ0 1690 aaKnown RBP19.16■□□□□ 0.66
CSPG5-202ENST00000383738 SF3B1O75533 1304 aaKnown RBP eCLIP19.15■□□□□ 0.66
CSPG5-202ENST00000383738 F2P00734 622 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 KRT33BQ14525 404 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 PSMD5Q16401 504 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 MARC1Q5VT66 337 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 SNX27Q96L92 541 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 EBF4Q9BQW3 602 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 DUSP16Q9BY84 665 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 FBXO44Q9H4M3 255 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 ATP13A1Q9HD20 1204 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 TCRBV9S1A1TA0A576 114 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 C9IYK1 514 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 SNX2O60749 519 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 IQCF3P0C7M6 154 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 SLC2A3P11169 496 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 PSMB4P28070 264 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 GJA9P57773 515 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 C6orf52Q5T4I8 152 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 TMCO2Q7Z6W1 182 aaPredicted RBP19.15■□□□□ 0.66
CSPG5-202ENST00000383738 XYLT1Q86Y38 959 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 HSFY1Q96LI6 401 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 KLHL5Q96PQ7 755 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 UNC93B1Q9H1C4 597 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 PNPOQ9NVS9 261 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 MORF4L1Q9UBU8 362 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 CDH9Q9ULB4 789 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 LRRC42Q9Y546 428 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 TBX18O95935 607 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 ST8SIA6P61647 398 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 MRPS5P82675 430 aaKnown RBP19.15■□□□□ 0.66
CSPG5-202ENST00000383738 SPDYAQ5MJ70 313 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 NAPEPLDQ6IQ20 393 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms