RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CNGA3Q16281 694 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 C6orf10Q5SRN2 563 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 RNASEH2BQ5TBB1 312 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 PGBD3Q8N328 593 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 ATXN2LQ8WWM7 1075 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 CMTM5Q96DZ9 223 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 CACYBPQ9HB71 228 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 ANLNQ9NQW6 1124 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 PLK2Q9NYY3 685 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 NR2E3Q9Y5X4 410 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 MYH4Q9Y623 1939 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 A0A1W2PPM1 405 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 TLL1O43897 1013 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 TRIM13O60858 407 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 BCL2L1Q07817 233 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 MORN1Q5T089 497 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 UGT3A1Q6NUS8 523 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 DRICH1Q6PGQ1 229 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 OLFML1Q6UWY5 402 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 HFE2Q6ZVN8 426 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 TMEM130Q8N3G9 435 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 SLC35B2Q8TB61 432 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 VRTNQ9H8Y1 702 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 PKD2L2Q9NZM6 624 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 FLRT1Q9NZU1 646 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 GPR32O75388 356 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 DGKIO75912 1065 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 DDHD2O94830 711 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 FSBPO95073 299 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 LMNAP02545 664 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 LAG3P18627 525 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 IL1RL1Q01638 556 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 CERCAMQ5T4B2 595 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 SCARA3Q6AZY7 606 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 CCDC126Q96EE4 140 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 SUSD3Q96L08 255 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 GLOD4Q9HC38 313 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 SYBUQ9NX95 663 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 FAF1Q9UNN5 650 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 SCN9AQ15858 1988 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 LZTS3O60299 673 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 TBL1XO60907 577 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 NOL3O60936 208 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 ATXN3P54252 364 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 KLC1Q07866 573 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 ARMC12Q5T9G4 340 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 AGMOQ6ZNB7 445 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 OTOP3Q7RTS5 596 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 CTU1Q7Z7A3 348 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 AGAP11Q8TF27 550 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 CKAP2Q8WWK9 683 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 SGIP1Q9BQI5 828 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 FBXW11Q9UKB1 542 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 ACTL7BQ9Y614 415 aa14.41□□□□□ -0.1
SHROOM1-203ENST00000378679 MEIS3P2A8K0S8 358 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 ANGPT2O15123 496 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 MT-CO1P00395 513 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 EDN1P05305 212 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 TSHRP16473 764 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 PLK1P53350 603 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 RFWD3Q6PCD5 774 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 TRABD2AQ86V40 505 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 FBXO22Q8NEZ5 403 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 FUBP3Q96I24 572 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 PIGVQ9NUD9 493 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 TMEM59LQ9UK28 342 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 COL4A1P02462 1669 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 TRAV19A0A0A6YYK7 116 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 A0A1W2PQ45 241 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 A0A1W2PQY0 241 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 ESRRBO95718 433 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 MPOP05164 745 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 ITGB6P18564 788 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 ZNF132P52740 706 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 DPYSL2Q16555 572 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 FNBP1LQ5T0N5 605 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 ZDHHC24Q6UX98 284 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 RGS9BPQ6ZS82 235 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 MAB21L3Q8N8X9 362 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 TMEM120AQ9BXJ8 343 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 MYH8P13535 1937 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 RBM47A0AV96 593 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 E9PAM4 449 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 TPP1O14773 563 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 PROZP22891 400 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 APLP1P51693 650 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 CLDN10P78369 228 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 TBCCQ15814 346 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 IFNEQ86WN2 208 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 MRPL1Q9BYD6 325 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 IGFLR1Q9H665 355 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 NMRAL1Q9HBL8 299 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 MRPS23Q9Y3D9 190 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 PCDHA11Q9Y5I1 949 aa14.4□□□□□ -0.1
SHROOM1-203ENST00000378679 STAU1O95793 577 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 TBX18O95935 607 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 SERPINE1P05121 402 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 ACRP10323 421 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms