RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 BNIPLQ7Z465 357 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 METTL3Q86U44 580 aaKnown RBP11.95□□□□□ -0.5
NPHP4-202ENST00000378161 DNAAF5Q86Y56 855 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 TEX47Q8TBZ9 253 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 SGK3Q96BR1 496 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 MNTQ99583 582 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ZSWIM1Q9BR11 485 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 C9orf16Q9BUW7 83 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 APOL5Q9BWW9 433 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 SYTL2Q9HCH5 934 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ITGA11Q9UKX5 1188 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PRPF19Q9UMS4 504 aaKnown RBP11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ABCG2Q9UNQ0 655 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 RIMS1Q86UR5 1692 aaKnown RBP11.95□□□□□ -0.5
NPHP4-202ENST00000378161 H3BNH8 94 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 SYNCRIPO60506 623 aaKnown RBP11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PKNOX1P55347 436 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 DLG2Q15700 870 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 TAF2Q6P1X5 1199 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ENOSF1Q7L5Y1 443 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 KIF18BQ86Y91 864 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 STX19Q8N4C7 294 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ARL6IP6Q8N6S5 226 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ARL5BQ96KC2 179 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 GAL3ST1Q99999 423 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 TTYH2Q9BSA4 534 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 BTNL10A8MVZ5 291 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 LZTS3O60299 673 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 NDUFS2O75306 463 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 DNAJB5O75953 348 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 P4HBP07237 508 aaKnown RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 SNRPAP09012 282 aaKnown RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 NPR3P17342 541 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 PRKAR1BP31321 381 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 SRP54P61011 504 aaKnown RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 TFDP1Q14186 410 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 GALEQ14376 348 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 CA9Q16790 459 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 UGP2Q16851 508 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 LSM12Q3MHD2 195 aaKnown RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 DHRS4L2Q6PKH6 230 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ZNF600Q6ZNG1 722 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 PNPT1Q8TCS8 783 aaKnown RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 FAR1Q8WVX9 515 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 DCPSQ96C86 337 aaKnown RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ALPK1Q96QP1 1244 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 SEPT9Q9UHD8 586 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 HCN4Q9Y3Q4 1203 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 H7C2Y5 167 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 MEN1O00255 615 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 NTRK1P04629 796 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 MMP8P22894 467 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 PSMB9P28065 219 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 MAPKAPK2P49137 400 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 SLC18A2Q05940 514 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 MPP2Q14168 576 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 RPS6KA2Q15349 733 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 Q3ZCU0 254 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 RALGPS1Q5JS13 557 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 KLHL17Q6TDP4 642 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 RASSF6Q6ZTQ3 369 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 CCDC185Q8N715 623 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ASZ1Q8WWH4 475 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 CUEDC1Q9NWM3 386 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 TNFRSF10DQ9UBN6 386 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 OR6C70A6NIJ9 312 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 EIF3DO15371 548 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 MSH3P20585 1137 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 CRKP46108 304 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 APLP1P51693 650 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ARHGDIAP52565 204 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 TNFAIP1Q13829 316 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 OXA1LQ15070 435 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 OGFRL1Q5TC84 451 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-202ENST00000378161 SCYL2Q6P3W7 929 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 XKRXQ6PP77 449 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ZDHHC24Q6UX98 284 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 RFX6Q8HWS3 928 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 IRF2BP1Q8IU81 584 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 RHOT1Q8IXI2 618 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 PSD4Q8NDX1 1056 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 DAGLAQ9Y4D2 1042 aa11.94□□□□□ -0.5
NPHP4-202ENST00000378161 ATRNO75882 1429 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 FAM92AA1XBS5 289 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 GMDSO60547 372 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 MLLT3P42568 568 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 ZNF33BQ06732 778 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 PPP2R5DQ14738 602 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 AMER2Q8N7J2 671 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 LEMD2Q8NC56 503 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 ENKURQ8TC29 256 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 PAFAH2Q99487 392 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 LXNQ9BS40 222 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms