RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SOWAHBA6NEL2 793 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 DNM1LO00429 736 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 ATP4AP20648 1035 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 BCL2L1Q07817 233 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 NEPROQ6NW34 567 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 KYQ8NBH2 561 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 TADA1Q96BN2 335 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 DUSP16Q9BY84 665 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 FAM53CQ9NYF3 392 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 H2AFY2Q9P0M6 372 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 TUBGCP4Q9UGJ1 667 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 CLDN5O00501 218 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 IGSF6O95976 241 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 SOAT1P35610 550 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 MRPS5P82675 430 aaKnown RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 TUSC3Q13454 348 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 AGKQ53H12 422 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 RAP1GAP2Q684P5 730 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 GLT6D1Q7Z4J2 308 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 FBXO6Q9NRD1 293 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 LNPEPQ9UIQ6 1025 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 PHGDHO43175 533 aaKnown RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 OCM2P0CE71 109 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 OCMP0CE72 109 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 SERPINH1P50454 418 aaKnown RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 NAB1Q13506 487 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 SPRYD7Q5W111 196 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 SCARA3Q6AZY7 606 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 CRELD2Q6UXH1 353 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 C16orf59Q7L2K0 433 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 HDDC2Q7Z4H3 204 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 OOSP2Q86WS3 158 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 MRPL45Q9BRJ2 306 aaKnown RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 XPNPEP1Q9NQW7 623 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 FKTNO75072 461 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 ERCC2P18074 760 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 PBLDP30039 288 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 CHRNB3Q05901 458 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 CCDC142Q17RM4 750 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 FUT11Q495W5 492 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 DCAF12L1Q5VU92 463 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 IYDQ6PHW0 289 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 CCDC81Q6ZN84 652 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 FAM35AQ86V20 835 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 PIWIL2Q8TC59 973 aaKnown RBP15.24■□□□□ 0.03
NPHP4-201ENST00000378156 LGMNQ99538 433 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 SH3GL1Q99961 368 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 MECRQ9BV79 373 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 SESN1Q9Y6P5 492 aa15.24■□□□□ 0.03
NPHP4-201ENST00000378156 NFKBIEO00221 500 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 HOXD13P35453 343 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 BRCC3P46736 316 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 HADHBP55084 474 aaKnown RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 FBXW4P57775 412 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ITGA7Q13683 1181 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ZDHHC24Q6UX98 284 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 C11orf96Q7Z7L8 435 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 C2orf49Q9BVC5 232 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 YIPF2Q9BWQ6 316 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 SYNDIG1Q9H7V2 258 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 NMRAL1Q9HBL8 299 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 APOBEC3GQ9HC16 384 aaKnown RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 IMPAD1Q9NX62 359 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 GRIN2DO15399 1336 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ATRNL1Q5VV63 1379 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 LRCH4O75427 683 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ATP5BP06576 529 aaKnown RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 GOT1P17174 413 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 HOXB8P17481 243 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 VCLP18206 1134 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 SLC1A5Q15758 541 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ZFYVE19Q96K21 471 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 C12orf65Q9H3J6 166 aaKnown RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 MMADHCQ9H3L0 296 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ELOVL6Q9H5J4 265 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 DNMT3LQ9UJW3 386 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 PNMA8BQ9ULN7 279 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 PSMG1O95456 288 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 CSH1P0DML2 217 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 CSH2P0DML3 217 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ALOX15P16050 662 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ARMC12Q5T9G4 340 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 THG1LQ9NWX6 298 aaKnown RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 UBDO15205 165 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 TREHO43280 583 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ZNF23P17027 643 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ITGB6P18564 788 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 HDCP19113 662 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 MAPK1P28482 360 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 PRIM2P49643 509 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 PRKAA2P54646 552 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 WASHC5Q12768 1159 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 ARMCX4Q5H9R4 360 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 C12orf50Q8NA57 414 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-201ENST00000378156 OTULINQ96BN8 352 aa15.23■□□□□ 0.03
NPHP4-201ENST00000378156 COL14A1Q05707 1796 aaKnown RBP15.22■□□□□ 0.03
NPHP4-201ENST00000378156 MTA2O94776 668 aa15.22■□□□□ 0.03
NPHP4-201ENST00000378156 CDKN2BP42772 138 aa15.22■□□□□ 0.03
NPHP4-201ENST00000378156 CDK7P50613 346 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms