RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	CIR1	Q86X95	450 aa	Predicted RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	SCUBE1	Q8IWY4	988 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CRIPAK	Q8N1N5	446 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CFAP52	Q8N1V2	620 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PAF1	Q8N7H5	531 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PPP1R14B	Q96C90	147 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PABPC5	Q96DU9	382 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PGAP3	Q96FM1	320 aa	Predicted RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.92	□□□□□ -0.5	4e-7	■■■■■ 37.5
LMO7-204	ENST00000377499	DRC3	Q9H069	523 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	INSL6	Q9Y581	213 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CCT8L1P	A6NM43	557 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	DNAJC8	O75937	253 aa	Predicted RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	GJB5	O95377	273 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	KCNQ1	P51787	676 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	COG7	P83436	770 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	RHBDF2	Q6PJF5	856 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	KDM7A	Q6ZMT4	941 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	CCDC197	Q8NCU1	140 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	MGARP	Q8TDB4	240 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	APOL2	Q9BQE5	337 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	SPON2	Q9BUD6	331 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	STMN4	Q9H169	189 aa	Predicted RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	MTIF3	Q9H2K0	278 aa	Known RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TMBIM4	Q9HC24	238 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	DNMT3L	Q9UJW3	386 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TLR6	Q9Y2C9	796 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	BACE2	Q9Y5Z0	518 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	HS3ST4	Q9Y661	456 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499		A0A0A0MRY4	1105 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	HACD1	B0YJ81	288 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TEX28	O15482	410 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TSPAN3	O60637	253 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	USP12	O75317	370 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	BAIAP3	O94812	1187 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	MBL2	P11226	248 aa	Predicted RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	VAV1	P15498	845 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	PSMB4	P28070	264 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	ELK3	P41970	407 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	CCR3	P51677	355 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	CFAP157	Q5JU67	520 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	NPW	Q8N729	165 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	CEP70	Q8NHQ1	597 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	SPATA13	Q96N96	652 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	ELAC2	Q9BQ52	826 aa	Known RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	FOXP3	Q9BZS1	431 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	GKN1	Q9NS71	199 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TMCO1	Q9UM00	188 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	VIM	P08670	466 aa	Known RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	DSG1	Q02413	1049 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	DPYS	Q14117	519 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	PDE1C	Q14123	709 aa	Predicted RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TMEM214	Q6NUQ4	689 aa	Known RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	RFWD3	Q6PCD5	774 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	VSIG1	Q86XK7	387 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	DENND1C	Q8IV53	801 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	MDM1	Q8TC05	714 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TTC25	Q96NG3	672 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	HAPLN3	Q96S86	360 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	TCF25	Q9BQ70	676 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	CTNNAL1	Q9UBT7	734 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	RBMX2	Q9Y388	322 aa	Known RBP	11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	ASB3	Q9Y575	518 aa		11.91	□□□□□ -0.5
LMO7-204	ENST00000377499	SERPINB3	P29508	390 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	SCAP	Q12770	1279 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	AUH	Q13825	339 aa	Known RBP	11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	RAVER1	Q8IY67	606 aa	Known RBP	11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	LGI2	Q8N0V4	545 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	TTC30B	Q8N4P2	665 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	ARFGAP2	Q8N6H7	521 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	NAT8L	Q8N9F0	302 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	CCT6B	Q92526	530 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	LRRC4C	Q9HCJ2	640 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	CLIC5	Q9NZA1	410 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	ARHGAP42	A6NI28	874 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	DCLK1	O15075	740 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	CKM	P06732	381 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	KRT16	P08779	473 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	MYL4	P12829	197 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	NQO1	P15559	274 aa	Known RBP	11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	ETFB	P38117	255 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	MTTP	P55157	894 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	PRPSAP1	Q14558	356 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	DDX53	Q86TM3	631 aa	Known RBP	11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	ELMOD1	Q8N336	334 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	ANKRD42	Q8N9B4	389 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	PPFIBP2	Q8ND30	876 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	NMD3	Q96D46	503 aa	Known RBP	11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	OSBPL2	Q9H1P3	480 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	CERS4	Q9HA82	394 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499	SP110	Q9HB58	689 aa		11.9	□□□□□ -0.5
LMO7-204	ENST00000377499		A0A1W2PQ67	120 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	CCDC78	A2IDD5	438 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF487	B1APH4	448 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499		F5H5T6	163 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	NCAM2	O15394	837 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	OR1E1	P30953	314 aa		11.9	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms