RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 OSBPL6Q9BZF3 934 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 VRTNQ9H8Y1 702 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 ANLNQ9NQW6 1124 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 PNPLA3Q9NST1 481 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 FZD1Q9UP38 647 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 HACD1B0YJ81 288 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ZBTB42B2RXF5 422 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 GOLGA8TH3BQL2 631 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 C8BP07358 591 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 CTBSQ01459 385 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 PRKAA1Q13131 559 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 TRIM25Q14258 630 aaKnown RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 PKDCCQ504Y2 493 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ZYG11AQ6WRX3 759 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ZBTB8BQ8NAP8 495 aaPredicted RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 MFSD3Q96ES6 412 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 C11orf84Q9BUA3 381 aaPredicted RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 SQORQ9Y6N5 450 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ZNF638Q14966 1978 aaKnown RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ZCWPW2A0A1B0GU75 182 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 H0YJX3 145 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ADSLP30566 484 aaPredicted RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 BACE1P56817 501 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 RALGDSQ12967 914 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 SOWAHAQ2M3V2 549 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 HMBOX1Q6NT76 420 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 MAMDC4Q6UXC1 1216 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 PATL1Q86TB9 770 aaKnown RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 CLVS1Q8IUQ0 354 aaPredicted RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 HERC6Q8IVU3 1022 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 CPNE9Q8IYJ1 553 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 LZTR1Q8N653 840 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 DCUN1D5Q9BTE7 237 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 TEX13BQ9BXU2 312 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 LRRC40Q9H9A6 602 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ZNF277Q9NRM2 450 aaPredicted RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 TMPRSS4Q9NRS4 437 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 SLC39A10Q9ULF5 831 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 SCN4AP35499 1836 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 TMX2-CTNND1H3BSU7 103 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 TFPTP0C1Z6 253 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 ARSAP15289 507 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 HMGCS2P54868 508 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 CYP2R1Q6VVX0 501 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 CROCCP3Q8IVE0 287 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 SLC35F5Q8WV83 523 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 NOL11Q9H8H0 719 aaKnown RBP16.78■□□□□ 0.28
TRIM39-201ENST00000376656 TBCCD1Q9NVR7 557 aa16.78■□□□□ 0.28
TRIM39-201ENST00000376656 PHIPQ8WWQ0 1821 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 PHGDHO43175 533 aaKnown RBP16.77■□□□□ 0.28
TRIM39-201ENST00000376656 HTRA2O43464 458 aaPredicted RBP16.77■□□□□ 0.28
TRIM39-201ENST00000376656 PTPN9P43378 593 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 OAZ1P54368 228 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 IFRD2Q12894 506 aaPredicted RBP16.77■□□□□ 0.28
TRIM39-201ENST00000376656 PDAP1Q13442 181 aaKnown RBP16.77■□□□□ 0.28
TRIM39-201ENST00000376656 GLRA4Q5JXX5 417 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 MTMR14Q8NCE2 650 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 LPGAT1Q92604 370 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 VPS39Q96JC1 886 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 SCYL1Q96KG9 808 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 APBA2Q99767 749 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 IL22Q9GZX6 179 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 GTF2IRD1Q9UHL9 959 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 ZNHIT2Q9UHR6 403 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 TNFSF13BQ9Y275 285 aa16.77■□□□□ 0.28
TRIM39-201ENST00000376656 CKMT2P17540 419 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 RHDQ02161 417 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 MBTD1Q05BQ5 628 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 MPP3Q13368 585 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 EML3Q32P44 896 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 PID1Q7Z2X4 250 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 FAM131BQ86XD5 332 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 FAM47BQ8NA70 645 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 CENPIQ92674 756 aaPredicted RBP16.77■□□□□ 0.27
TRIM39-201ENST00000376656 ZBED3Q96IU2 234 aaPredicted RBP16.77■□□□□ 0.27
TRIM39-201ENST00000376656 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.27
TRIM39-201ENST00000376656 SUCOQ9UBS9 1254 aaKnown RBP16.77■□□□□ 0.27
TRIM39-201ENST00000376656 KCNK1O00180 336 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 PEX10O60683 326 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 HDCP19113 662 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 EPHX2P34913 555 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 AVPR1AP37288 418 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 ARL4AP40617 200 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 PHKA2P46019 1235 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 CD97P48960 835 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 NUP107P57740 925 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 PRAMEP78395 509 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 GRM3Q14832 879 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 GIPC3Q8TF64 312 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 ISOC1Q96CN7 298 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 PRDM12Q9H4Q4 367 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 CLK4Q9HAZ1 481 aaKnown RBP16.76■□□□□ 0.27
TRIM39-201ENST00000376656 IARS2Q9NSE4 1012 aaKnown RBP16.76■□□□□ 0.27
TRIM39-201ENST00000376656 DUS2Q9NX74 493 aaKnown RBP16.76■□□□□ 0.27
TRIM39-201ENST00000376656 VTI1BQ9UEU0 232 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 KIAA1257Q9ULG3 409 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 VANGL2Q9ULK5 521 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 ADAMTS5Q9UNA0 930 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 TUBA4AP68366 448 aa16.76■□□□□ 0.27
TRIM39-201ENST00000376656 SLC10A6Q3KNW5 377 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms