RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PDE5AO76074 875 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 FAM200BP0CF97 657 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 COL6A2P12110 1019 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 MAP3K7CLP57077 242 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 EIF4EBP2Q13542 120 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ANO4Q32M45 955 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ARTNQ5T4W7 220 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 OGFRL1Q5TC84 451 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 LIPMQ5VYY2 423 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 WSCD1Q658N2 575 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ITPRIPL1Q6GPH6 555 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 SLC30A9Q6PML9 568 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ZC3HC1Q86WB0 502 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 CCDC117Q8IWD4 279 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 AGAP3Q96P47 875 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 LENG8Q96PV6 779 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 KCNK16Q96T55 309 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ILKAPQ9H0C8 392 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 TCF7L2Q9NQB0 619 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 STK39Q9UEW8 545 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 NEU3Q9UQ49 428 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 CABYRO75952 493 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 UBTFL6P0CB48 400 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 NFKB1P19838 968 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 IGFBP6P24592 240 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 INHBEP58166 350 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 ROR2Q01974 943 aaKnown RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 THEMIS2Q5TEJ8 643 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 CWF19L1Q69YN2 538 aaKnown RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 GPRIN1Q7Z2K8 1008 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 TMEM126BQ8IUX1 230 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 MFN1Q8IWA4 741 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 SLC26A7Q8TE54 656 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 STYXQ8WUJ0 223 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 DNAJB3Q8WWF6 145 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 SREK1Q8WXA9 508 aaKnown RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 BTBD9Q96Q07 612 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 COLEC11Q9BWP8 271 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 RHOJQ9H4E5 214 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 MAN1C1Q9NR34 630 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 TMEM30AQ9NV96 361 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 SYNJ2BP-COX16A0A087WUM0 186 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 RGSL1A5PLK6 1076 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 PDHXO00330 501 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 HDAC3O15379 428 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 PSMD3O43242 534 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 F9P00740 461 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 THRAP10827 490 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 GNAT1P11488 350 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 CD1EP15812 388 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 NMBRP28336 390 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 HOXC8P31273 242 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 ERFP50548 548 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 RPL14P50914 215 aaKnown RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 CRYBB1P53674 252 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 EPHB1P54762 984 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 CDH17Q12864 832 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 CUL3Q13618 768 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 TTLL12Q14166 644 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 GRM3Q14832 879 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 HERC3Q15034 1050 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 USP50Q70EL3 339 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 LSMEM2Q8N112 164 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 SCML4Q8N228 414 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 RP9Q8TA86 221 aaKnown RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 GPR78Q96P69 363 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 ACE2Q9BYF1 805 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 CSNK1G1Q9HCP0 422 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 COX16Q9P0S2 106 aa10.86□□□□□ -0.67
ABCF1-202ENST00000376545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-202ENST00000376545 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 E2F8A0AVK6 867 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 E9PBE3 544 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 KLHL41O60662 606 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 KRT34O76011 436 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 SLC35E2BP0CK96 405 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 PIK3R1P27986 724 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 GABRB3P28472 473 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 PEX6Q13608 980 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 LPCAT4Q643R3 524 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 CNTD1Q8N815 330 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 DNAAF3Q8N9W5 541 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 GDPD5Q8WTR4 605 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 DDX50Q9BQ39 737 aaKnown RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 IARS2Q9NSE4 1012 aaKnown RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 VTI1BQ9UEU0 232 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 PTPRDP23468 1912 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 SLCO1B7G3V0H7 640 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 CHRNGP07510 517 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 F7P08709 466 aaPredicted RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 PEX2P28328 305 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 SERPINB6P35237 376 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 AQP4P55087 323 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 SMAD1Q15797 465 aaKnown RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 ZNF423Q2M1K9 1284 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 LSM12Q3MHD2 195 aaKnown RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 ARL13BQ3SXY8 428 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms