RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 IRX4P78413 519 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 YWHAHQ04917 246 aaPredicted RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 C16orf46Q6P387 395 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 SHKBP1Q8TBC3 707 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ZSCAN18Q8TBC5 510 aaPredicted RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 DTNBP1Q96EV8 351 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 CERS2Q96G23 380 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 NSL1Q96IY1 281 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 TEKT5Q96M29 485 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 PLEKHG4BQ96PX9 1271 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 HAPLN3Q96S86 360 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 APOL2Q9BQE5 337 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 LRRC40Q9H9A6 602 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 RHBDL2Q9NX52 303 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ARHGEF38Q9NXL2 777 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 UBP1Q9NZI7 540 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 PCDHB8Q9UN66 801 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 MAGED2Q9UNF1 606 aaPredicted RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 MTO1Q9Y2Z2 717 aaKnown RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 PTPRDP23468 1912 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 COL4A4P53420 1690 aaPredicted RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 FAM237BA0A1B0GVD1 139 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ARHGAP42A6NI28 874 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 TNFRSF10BO14763 440 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 BPGMP07738 259 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ITGA2BP08514 1039 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 IMPDH2P12268 514 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ACLYP53396 1101 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 NAB1Q13506 487 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 CERCAMQ5T4B2 595 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ATG16L1Q676U5 607 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 BEND5Q7L4P6 421 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 SCD5Q86SK9 330 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ZNF669Q96BR6 464 aaPredicted RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 TRIM62Q9BVG3 475 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 VCX3BQ9H321 246 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 MMADHCQ9H3L0 296 aaPredicted RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 VCX3AQ9NNX9 186 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 RGS18Q9NS28 235 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 ABCC13Q9NSE7 274 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 HSFX1Q9UBD0 423 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 NUDT5Q9UKK9 219 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 IRAK2O43187 625 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 CKBP12277 381 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 PDE1BQ01064 536 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 PDE1CQ14123 709 aaPredicted RBP14.23□□□□□ -0.13
MSH5-202ENST00000375740 ITPRIPL1Q6GPH6 555 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 ARHGAP36Q6ZRI8 547 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 SDCCAG8Q86SQ7 713 aaPredicted RBP14.23□□□□□ -0.13
MSH5-202ENST00000375740 SCN4BQ8IWT1 228 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.23□□□□□ -0.13
MSH5-202ENST00000375740 ACMSDQ8TDX5 336 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 USP33Q8TEY7 942 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 DPF3Q92784 378 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 CASP10Q92851 521 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 DNAJC1Q96KC8 554 aaKnown RBP14.23□□□□□ -0.13
MSH5-202ENST00000375740 VAT1Q99536 393 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 TTC1Q99614 292 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 TRPV6Q9H1D0 765 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 ZNF212Q9UDV6 495 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 ARHGEF37A1IGU5 675 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 ERI2A8K979 691 aaKnown RBP14.23□□□□□ -0.13
MSH5-202ENST00000375740 PDLIM1O00151 329 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 DFFAO00273 331 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 MSI1O43347 362 aaKnown RBP14.23□□□□□ -0.13
MSH5-202ENST00000375740 ATP9BO43861 1147 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 PAGE1O75459 146 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 TPH1P17752 444 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 CYP2C18P33260 490 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 SLC39A12Q504Y0 691 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 SPDYAQ5MJ70 313 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 OTOP3Q7RTS5 596 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 RNF180Q86T96 592 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 TMEM135Q86UB9 458 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 CNTD1Q8N815 330 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 FAM161BQ96MY7 647 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 TXNDC16Q9P2K2 825 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 EMCNQ9ULC0 261 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 NEU3Q9UQ49 428 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 MRPL42Q9Y6G3 142 aaKnown RBP14.23□□□□□ -0.13
MSH5-202ENST00000375740 SQORQ9Y6N5 450 aa14.23□□□□□ -0.13
MSH5-202ENST00000375740 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.22□□□□□ -0.13
MSH5-202ENST00000375740 INPPL1O15357 1258 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 BIRC5O15392 142 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 ALDH1A1P00352 501 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 MYL2P10916 166 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 TPP2P29144 1249 aaPredicted RBP14.22□□□□□ -0.13
MSH5-202ENST00000375740 CDK7P50613 346 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 LRRC36Q1X8D7 754 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 ANKRD20A4Q4UJ75 823 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 CLLU1OSQ5K130 101 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 GLB1LQ6UWU2 654 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 KYAT3Q6YP21 454 aaKnown RBP14.22□□□□□ -0.13
MSH5-202ENST00000375740 SLC25A41Q8N5S1 370 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
MSH5-202ENST00000375740 NMD3Q96D46 503 aaKnown RBP14.22□□□□□ -0.13
MSH5-202ENST00000375740 C7orf26Q96N11 449 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 NR1H4Q96RI1 486 aaPredicted RBP14.22□□□□□ -0.13
MSH5-202ENST00000375740 C20orf27Q9GZN8 174 aa14.22□□□□□ -0.13
MSH5-202ENST00000375740 EBF3Q9H4W6 596 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms