RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 COL26A1Q96A83 441 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 LMLNQ96KR4 655 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 DDX50Q9BQ39 737 aaKnown RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.52□□□□□ -0.41
LSM2-208ENST00000375661 ZNHIT6Q9NWK9 470 aaKnown RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 ASNSD1Q9NWL6 643 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 ADAM22Q9P0K1 906 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 IMPACTQ9P2X3 320 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 AK5Q9Y6K8 562 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 TEX51A0A1B0GUA7 166 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 A0A1W2PP55 124 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 TCRBV5S1A1TA0A578 114 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 CAPN8A6NHC0 703 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 CAPN9O14815 690 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 MSI1O43347 362 aaKnown RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 ACSL4O60488 711 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 RTN2O75298 545 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 C1QL1O75973 258 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 FTLP02792 175 aaPredicted RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 WNT1P04628 370 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 GLI1P08151 1106 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 FECHP22830 423 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 EPHA8P29322 1005 aaPredicted RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 GSCP56915 257 aaPredicted RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 SNX16P57768 344 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 SEMG2Q02383 582 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 TARDBPQ13148 414 aaKnown RBP eCLIP12.51□□□□□ -0.41
LSM2-208ENST00000375661 FAM133BQ5BKY9 247 aaKnown RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
LSM2-208ENST00000375661 BEND5Q7L4P6 421 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 SLC26A9Q7LBE3 791 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 ZDHHC17Q8IUH5 632 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 CCDC117Q8IWD4 279 aaPredicted RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 MCOLN2Q8IZK6 566 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 EID2Q8N6I1 236 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 HJURPQ8NCD3 748 aaPredicted RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 RFFLQ8WZ73 363 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 FGF11Q92914 225 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 FAM149B1Q96BN6 582 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 PANX2Q96RD6 677 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 OMDQ99983 421 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 ISCUQ9H1K1 167 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 NEUROG2Q9H2A3 272 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 NHEJ1Q9H9Q4 299 aaPredicted RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 EBF2Q9HAK2 575 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 AASDHPPTQ9NRN7 309 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 TMEM59LQ9UK28 342 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 NAALADL1Q9UQQ1 740 aa12.51□□□□□ -0.41
LSM2-208ENST00000375661 ARID1BQ8NFD5 2236 aaPredicted RBP12.51□□□□□ -0.41
LSM2-208ENST00000375661 EDDM13A0A1B0GTR0 161 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 GOLGA8SH3BPF8 625 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 TLR4O00206 839 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 MID1O15344 667 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 MAGEC1O60732 1142 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 HSF2BPO75031 334 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 GRAP2O75791 330 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 RNASEH2AO75792 299 aaKnown RBP12.5□□□□□ -0.41
LSM2-208ENST00000375661 MOCS3O95396 460 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 GJB6O95452 261 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 ADH1BP00325 375 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 CALB1P05937 261 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 GOT1P17174 413 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 C5AR1P21730 350 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 SLC6A4P31645 630 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 SLC8A1P32418 973 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 ACTN2P35609 894 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 NUDT1P36639 197 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 SCNN1AP37088 669 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 NXPH1P58417 271 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 OVGP1Q12889 678 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 DNAJC3Q13217 504 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 NNTQ13423 1086 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 GSE1Q14687 1217 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 EFHC1Q5JVL4 640 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 C9orf64Q5T6V5 341 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 RFWD3Q6PCD5 774 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 GPR155Q7Z3F1 870 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 IQCHQ86VS3 1027 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 MMAAQ8IVH4 418 aaKnown RBP12.5□□□□□ -0.41
LSM2-208ENST00000375661 DEFB106AQ8N104 65 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 MFSD2AQ8NA29 543 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 MRGPRX3Q96LB0 322 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 FCRL3Q96P31 734 aaPredicted RBP12.5□□□□□ -0.41
LSM2-208ENST00000375661 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 POPDC2Q9HBU9 364 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 SERGEFQ9UGK8 458 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 INTS6Q9UL03 887 aaKnown RBP12.5□□□□□ -0.41
LSM2-208ENST00000375661 ERVW-1Q9UQF0 538 aa12.5□□□□□ -0.41
LSM2-208ENST00000375661 PTPRQQ9UMZ3 2332 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 CBX4O00257 560 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 LATO43561 262 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 DAB1O75553 588 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 PRB1P04280 392 aa12.49□□□□□ -0.41
LSM2-208ENST00000375661 CKMT2P17540 419 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms