RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TEX44Q53QW1 395 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 CIR1Q86X95 450 aaPredicted RBP18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TEX9Q8N6V9 391 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 NKD2Q969F2 451 aaPredicted RBP18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TMEM237Q96Q45 408 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 THAP1Q9NVV9 213 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 CHKBQ9Y259 395 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 FCHO1O14526 889 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TSPAN8P19075 237 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 SERPINA4P29622 427 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 CYTH1Q15438 398 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TRMT11Q7Z4G4 463 aaKnown RBP18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 SPATA22Q8NHS9 363 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 ALG9Q9H6U8 611 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 IFNA8P32881 189 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 HSPA14Q0VDF9 509 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 NR6A1Q15406 480 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 CRYGNQ8WXF5 182 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 PIF1Q9H611 641 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 FBXO5Q9UKT4 447 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 FAM155BO75949 473 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 IL1R2P27930 398 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 PPM1AP35813 382 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 PEX5P50542 639 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 FLOT2Q14254 428 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 ACOX1Q15067 660 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 ASB8Q9H765 288 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 MID1IP1Q9NPA3 183 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 WARS2Q9UGM6 360 aaKnown RBP18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 SLC45A1Q9Y2W3 748 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 PMM2O15305 246 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 PIGNO95427 931 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 SKOR1P84550 965 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 FNDC3BQ53EP0 1204 aaKnown RBP18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 CYB5D1Q6P9G0 228 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 SPATA16Q9BXB7 569 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 C12orf65Q9H3J6 166 aaKnown RBP18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 EFR3BQ9Y2G0 817 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 DCXO43602 365 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 EPB42P16452 691 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 ST13P4Q8IZP2 240 aaPredicted RBP18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 ECSITQ9BQ95 431 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 EFCAB1Q9HAE3 211 aa18.22■□□□□ 0.51
PTPDC1-202ENST00000375360 BAIAP3O94812 1187 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 ATP5BP06576 529 aaKnown RBP18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 NQO1P15559 274 aaKnown RBP18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 PAX3P23760 479 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 CRABP2P29373 138 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 CDK18Q07002 472 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 PKN3Q6P5Z2 889 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 LINGO4Q6UY18 593 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 SETD3Q86TU7 594 aaPredicted RBP18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 BTN2A3PQ96KV6 586 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 CAB39LQ9H9S4 337 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 GID8Q9NWU2 228 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 MYO7AQ13402 2215 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 THRAP10827 490 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 PTPN9P43378 593 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 GDF10P55107 478 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 MTA1Q13330 715 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 PTPRNQ16849 979 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 NPAS4Q8IUM7 802 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 STK32AQ8WU08 396 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 CATSPERZQ9NTU4 200 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 C9IYK1 514 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 GLUD1P00367 558 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 C1RP00736 705 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 MSH3P20585 1137 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 GJA9P57773 515 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 PFKFB4Q16877 469 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 CDCA2Q69YH5 1023 aaPredicted RBP18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 FBXL19Q6PCT2 694 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 DOK6Q6PKX4 331 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 SAPCD2Q86UD0 394 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 C17orf80Q9BSJ5 609 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 SDCBP2Q9H190 292 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 GLOD4Q9HC38 313 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 TMPRSS4Q9NRS4 437 aa18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 THG1LQ9NWX6 298 aaKnown RBP18.21■□□□□ 0.51
PTPDC1-202ENST00000375360 PDZK1P1A8MUH7 402 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 NR5A2O00482 541 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 ITGA2BP08514 1039 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 CORO1AP31146 461 aaKnown RBP18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 XRCC4Q13426 336 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 PDE1CQ14123 709 aaPredicted RBP18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 CCDC153Q494R4 210 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 ANKS6Q68DC2 871 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 EFL1Q7Z2Z2 1120 aaKnown RBP18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 SYTL1Q8IYJ3 562 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 CKAP2Q8WWK9 683 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 PRCCQ92733 491 aaPredicted RBP18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 ZBED3Q96IU2 234 aaPredicted RBP18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 FIZ1Q96SL8 496 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 MECRQ9BV79 373 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 YIPF2Q9BWQ6 316 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 CHRAC1Q9NRG0 131 aa18.21■□□□□ 0.5
PTPDC1-202ENST00000375360 CCL22O00626 93 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 MT-CYBP00156 380 aaPredicted RBP18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 PRKAA1Q13131 559 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms