RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SCAMP5Q8TAC9 235 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CD99L2Q8TCZ2 262 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ARNTL2Q8WYA1 636 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 PPP1R14BQ96C90 147 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CAPNS2Q96L46 248 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 TRPV6Q9H1D0 765 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ECT2Q9H8V3 914 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 TBC1D13Q9NVG8 400 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 VANGL2Q9ULK5 521 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 NR2E3Q9Y5X4 410 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 A0A1W2PQ45 241 aaPredicted RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 A0A1W2PQY0 241 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ARHGAP42A6NI28 874 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 OR6C75A6NL08 312 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 I6L893 689 aaPredicted RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 ARVCFO00192 962 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 C2CD2LO14523 706 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 BIRC5O15392 142 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ZBTB24O43167 697 aaPredicted RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 AOC2O75106 756 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 DDHD2O94830 711 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SELPP16109 830 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 FUT4P22083 530 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 HOXD12P35452 270 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 PRMT2P55345 433 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CFAP157Q5JU67 520 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 GRTP1Q5TC63 336 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 TIGD7Q6NT04 549 aaPredicted RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 TRAF7Q6Q0C0 670 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 KYAT3Q6YP21 454 aaKnown RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 CTU1Q7Z7A3 348 aaKnown RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 ZNF276Q8N554 614 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ATPAF2Q8N5M1 289 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 FITM2Q8N6M3 262 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 NPWQ8N729 165 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CPNE1Q99829 537 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 TUBB6Q9BUF5 446 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CEP41Q9BYV8 373 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SIK2Q9H0K1 926 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SYBUQ9NX95 663 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CIDEBQ9UHD4 219 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ADAM28Q9UKQ2 775 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 PAGE1O75459 146 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 USP1O94782 785 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 GSTT1P30711 240 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 RASSF2P50749 326 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SMARCB1Q12824 385 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SPRED3Q2MJR0 410 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 MROH9Q5TGP6 573 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 KCTD11Q693B1 232 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 MSANTD2Q6P1R3 559 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 PACS1Q6VY07 963 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 LRRC8DQ7L1W4 858 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 RASSF3Q86WH2 238 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ZNF280BQ86YH2 543 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 NDUFAF2Q8N183 169 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 C10orf82Q8WW14 230 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SPOCK2Q92563 424 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CERS2Q96G23 380 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 C1orf74Q96LT6 269 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CENPOQ9BU64 300 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 OXCT2Q9BYC2 517 aaPredicted RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 IL22Q9GZX6 179 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.37□□□□□ -1.071e-6■■■□□ 16.6
UBR4-202ENST00000375224 COMMD8Q9NX08 183 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 NSMCE4AQ9NXX6 385 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 DCDC2Q9UHG0 476 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 PCDHB7Q9Y5E2 793 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 FAM237BA0A1B0GVD1 139 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 TMEM247A6NEH6 219 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 F5H423 210 aaPredicted RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 HOXA2O43364 376 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 HNRNPCL1O60812 293 aaKnown RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 GLRA3O75311 464 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 ANXA9O76027 345 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 JCHAINP01591 159 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 GP5P40197 560 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 CDH17Q12864 832 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 ELAVL2Q12926 359 aaKnown RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 INSCQ1MX18 579 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 FAM182AQ5T1J6 154 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 RNF220Q5VTB9 566 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 ZNF554Q86TJ5 538 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 NETO2Q8NC67 525 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 OR52K1Q8NGK4 314 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 OLA1Q9NTK5 396 aaKnown RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 MTO1Q9Y2Z2 717 aaKnown RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 HNRNPRO43390 633 aaKnown RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 UGT1A9O60656 530 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 NFKB1P19838 968 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 SPRP35270 261 aaPredicted RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 NCALDP61601 193 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 PDE1BQ01064 536 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 CAP1Q01518 475 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 BMPR2Q13873 1038 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 ANO4Q32M45 955 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 CTXN3Q4LDR2 81 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 SCD5Q86SK9 330 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms