RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 B4GALNT4Q76KP1 1039 aa16.67■□□□□ 0.26
TMEM53-203ENST00000372242 ATP11CQ8NB49 1132 aa16.67■□□□□ 0.26
TMEM53-203ENST00000372242 TMEM245Q9H330 911 aa16.67■□□□□ 0.26
TMEM53-203ENST00000372242 IPO11Q9UI26 975 aaKnown RBP16.67■□□□□ 0.26
TMEM53-203ENST00000372242 RAD54BQ9Y620 910 aa16.67■□□□□ 0.26
TMEM53-203ENST00000372242 TCRBV7S2A1N4TA0A589 114 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 FANCGO15287 622 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 SRPRAP08240 638 aaKnown RBP16.66■□□□□ 0.26
TMEM53-203ENST00000372242 SRCP12931 536 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 VAV1P15498 845 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 GALNT2Q10471 571 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 ACCSLQ4AC99 568 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 SH2D3CQ8N5H7 860 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 CARD9Q9H257 536 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 PRDM16Q9HAZ2 1276 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 RRAGDQ9NQL2 400 aaPredicted RBP16.66■□□□□ 0.26
TMEM53-203ENST00000372242 HS3ST2Q9Y278 367 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 EFR3BQ9Y2G0 817 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 MAFKO60675 156 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 PRAMEF11O60813 436 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 GPR37L1O60883 481 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 EPHX1P07099 455 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 NNMTP40261 264 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 GARSP41250 739 aaKnown RBP16.66■□□□□ 0.26
TMEM53-203ENST00000372242 ENPP2Q13822 863 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 SEL1L2Q5TEA6 688 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 CCDC181Q5TID7 509 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 SDE2Q6IQ49 451 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 ADAT2Q7Z6V5 191 aaKnown RBP16.66■□□□□ 0.26
TMEM53-203ENST00000372242 P3H4Q92791 437 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 LGMNQ99538 433 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 FAM118BQ9BPY3 351 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 SP110Q9HB58 689 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 PDFQ9HBH1 243 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 MMP17Q9ULZ9 603 aa16.66■□□□□ 0.26
TMEM53-203ENST00000372242 FCF1Q9Y324 198 aaKnown RBP16.66■□□□□ 0.26
TMEM53-203ENST00000372242 CHURC1-FNTBB4DL54 471 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 TJP3O95049 919 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 HOXB2P14652 356 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 TGM2P21980 687 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 SERPINH1P50454 418 aaKnown RBP16.65■□□□□ 0.26
TMEM53-203ENST00000372242 DLG2Q15700 870 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 KIAA1211LQ6NV74 962 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 TMEM92Q6UXU6 159 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 TRMT11Q7Z4G4 463 aaKnown RBP16.65■□□□□ 0.26
TMEM53-203ENST00000372242 SPEM1Q8N4L4 309 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 CCNYQ8ND76 341 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 GABRG3Q99928 467 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 SHROOM3Q8TF72 1996 aa16.65■□□□□ 0.26
TMEM53-203ENST00000372242 PRR33A8MZF0 331 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 NPC1O15118 1278 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 ATP9BO43861 1147 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 BNIP3LO60238 219 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 CEP104O60308 925 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 ATG13O75143 517 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 COL9A1P20849 921 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 AVPR2P30518 371 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 IL10RBQ08334 325 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 TMEM31Q5JXX7 168 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 FAM182AQ5T1J6 154 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 SYT13Q7L8C5 426 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 ZC3H18Q86VM9 953 aaKnown RBP16.64■□□□□ 0.25
TMEM53-203ENST00000372242 FRS2Q8WU20 508 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 C16orf45Q96MC5 204 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-203ENST00000372242 OLFM3Q96PB7 478 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 TNKS2Q9H2K2 1166 aa16.64■□□□□ 0.25
TMEM53-203ENST00000372242 SPATA6Q9NWH7 488 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-203ENST00000372242 UBA2Q9UBT2 640 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-203ENST00000372242 A0A1W2PQF6 199 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 ZSCAN5CA6NGD5 496 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 APOC4-APOC2K7ER74 178 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 APOC2P02655 101 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 MX2P20592 715 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 NR2C2P49116 596 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 OTUD4Q01804 1114 aaKnown RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 SATB1Q01826 763 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 SLC20A2Q08357 652 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 KLF1Q13351 362 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 E2F5Q15329 346 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 CRY1Q16526 586 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 HNRNPA1L2Q32P51 320 aaKnown RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 HSF5Q4G112 596 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 EOGTQ5NDL2 527 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 Q6ZVU0 165 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 SLC13A5Q86YT5 568 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 KDM1BQ8NB78 822 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 ACTL9Q8TC94 416 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 COG1Q8WTW3 980 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 OSBPL9Q96SU4 736 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 SNX12Q9UMY4 172 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 SYNCRIPO60506 623 aaKnown RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 ZNF821O75541 412 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 TMCC1O94876 653 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 PEX11BO96011 259 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 MAGEA9P43362 315 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 GEMIN4P57678 1058 aaKnown RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 ETF1P62495 437 aaKnown RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 SLC10A7Q0GE19 358 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms