RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 L1CAMP32004 1257 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 KCTD2Q14681 263 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 AAGABQ6PD74 315 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 RNF19BQ6ZMZ0 732 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 PTAR1Q7Z6K3 402 aaPredicted RBP16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 SULF1Q8IWU6 871 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 DTLQ9NZJ0 730 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 H3BNX3 289 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 AP1G1O43747 822 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 KLHL41O60662 606 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 CPOXP36551 454 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 SERPINB9P50453 376 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 TNFAIP2Q03169 654 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 LRP8Q14114 963 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 SNX29P2Q8IUI4 249 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 TFB1MQ8WVM0 346 aaKnown RBP16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 HTR3CQ8WXA8 447 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 LRRC39Q96DD0 335 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 ZNF778Q96MU6 729 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 CSPG4P5Q96PW8 444 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 TMEM216Q9P0N5 145 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 A0A1W2PPW3 197 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 KCNK1O00180 336 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 DCXO43602 365 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 FGFR3P22607 806 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 EDNRBP24530 442 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 ARL4AP40617 200 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 CDK9P50750 372 aaKnown RBP16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 COPAP53621 1224 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 CTBSQ01459 385 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 Q3C1V9 767 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 LDLRAP1Q5SW96 308 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 PLPPR4Q7Z2D5 763 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 EXOC8Q8IYI6 725 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 KHSRPQ92945 711 aaKnown RBP eCLIP16.26■□□□□ 0.193e-7■■■■■ 35.5
SYNCRIP-202ENST00000369622 ZNF670Q9BS34 389 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 ASB7Q9H672 318 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 PPME1Q9Y570 386 aa16.26■□□□□ 0.19
SYNCRIP-202ENST00000369622 SDR42E2A6NKP2 422 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 SIN3BO75182 1162 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 SNNO75324 88 aaPredicted RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 PPARGP37231 505 aaPredicted RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 WASHC5Q12768 1159 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 STILQ15468 1287 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 SOWAHAQ2M3V2 549 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 TEDDM1Q5T9Z0 273 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 MCUQ8NE86 351 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 CXorf38Q8TB03 319 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 BTBD9Q96Q07 612 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 KCTD15Q96SI1 283 aaPredicted RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 RABL2AQ9UBK7 228 aaPredicted RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 CDH22Q9UJ99 828 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 CORINQ9Y5Q5 1042 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 CROCCQ5TZA2 2017 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 GOLGA8QA0A0J9YX86 632 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 GOLGA8OA6NCC3 632 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 GOLGA8NF8WBI6 632 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 GABBR2O75899 941 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 MCF2P10911 925 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 NR1D2Q14995 579 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 PERM1Q5SV97 790 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 GET4Q7L5D6 327 aaPredicted RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 PID1Q7Z2X4 250 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 PQLC1Q8N2U9 271 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 DDI1Q8WTU0 396 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 C18orf25Q96B23 403 aaPredicted RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 C12orf43Q96C57 262 aaKnown RBP16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 HERC2P3Q9BVR0 1158 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 SEMA6AQ9H2E6 1030 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 SNTG2Q9NY99 539 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 ERAP1Q9NZ08 941 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 CSADQ9Y600 493 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 TRIP11Q15643 1979 aa16.25■□□□□ 0.19
SYNCRIP-202ENST00000369622 NEMP1O14524 444 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 FGF3P11487 239 aaPredicted RBP16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 PSMB4P28070 264 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 PGGT1BP53609 377 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 PRAMEP78395 509 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 NME3Q13232 169 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 APOFQ13790 326 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 PPP2R2DQ66LE6 453 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 MBLAC2Q68D91 279 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 TP53INP2Q8IXH6 220 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 AHI1Q8N157 1196 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 RTP4Q96DX8 246 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 TXNRD2Q9NNW7 524 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 EMCNQ9ULC0 261 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 PLIN3O60664 434 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 GCATO75600 419 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 USP2O75604 605 aaPredicted RBP16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 RALBP11234 206 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 KIZQ2M2Z5 673 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 PDPK2PQ6A1A2 396 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 DNAAF3Q8N9W5 541 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 CAMKK2Q96RR4 588 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 TBCBQ99426 244 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 APOL2Q9BQE5 337 aa16.24■□□□□ 0.19
SYNCRIP-202ENST00000369622 FAM49AQ9H0Q0 323 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms