RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ABRQ12979 859 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 PLPPR4Q7Z2D5 763 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 ETNPPLQ8TBG4 499 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 NLNQ9BYT8 704 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 ZYG11BQ9C0D3 744 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 GANQ9H2C0 597 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 CNTNAP1P78357 1384 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 KLRC4O43908 158 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 FGFR3P22607 806 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 ZNF143P52747 638 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-207ENST00000368226 GRIK3Q13003 919 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 ITGA7Q13683 1181 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 PARP6Q2NL67 630 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 POLNQ7Z5Q5 900 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 FAM126BQ8IXS8 530 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 FLCNQ8NFG4 579 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-207ENST00000368226 C2orf49Q9BVC5 232 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-207ENST00000368226 AVENQ9NQS1 362 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-207ENST00000368226 VPS45Q9NRW7 570 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 AHSPQ9NZD4 102 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 A0A0B4J269 797 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 C1orf232A0A0U1RR37 186 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 TREHO43280 583 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 PSMC3P17980 439 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 PPP1R16AQ96I34 528 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 PANX3Q96QZ0 392 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 CCDC166P0CW27 439 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 PPP2R1BP30154 601 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 SNRPD1P62314 119 aaKnown RBP13.08□□□□□ -0.32
PTPRK-207ENST00000368226 FMO1Q01740 532 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 NOGQ13253 232 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 RRP1BQ14684 758 aaKnown RBP13.08□□□□□ -0.32
PTPRK-207ENST00000368226 NDEL1Q9GZM8 345 aa13.08□□□□□ -0.32
PTPRK-207ENST00000368226 COX7A2P14406 83 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 TBX2Q13207 712 aaPredicted RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 OASLQ15646 514 aaKnown RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 USP39Q53GS9 565 aaKnown RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 UNC93AQ86WB7 457 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 CAVIN3Q969G5 261 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 NRDE2Q9H7Z3 1164 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 PAPSS1O43252 624 aaPredicted RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 TBC1D12O60347 775 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 CYP3A7P24462 503 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 HNRNPH1P31943 449 aaKnown RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 PKNOX1P55347 436 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 NEPROQ6NW34 567 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 IZUMO2Q6UXV1 221 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 UNC5AQ6ZN44 842 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 SNX32Q86XE0 403 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 TSEN2Q8NCE0 465 aaKnown RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 CENPTQ96BT3 561 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 OXNAD1Q96HP4 312 aaPredicted RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 COMMD8Q9NX08 183 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 PACSIN3Q9UKS6 424 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 BTRCQ9Y297 605 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 A0A1W2PQH9 124 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 SLCO1B7G3V0H7 640 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 FCHO1O14526 889 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 ZMPSTE24O75844 475 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 PIGNO95427 931 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 CBX6O95503 412 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 ERBB2P04626 1255 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 NTRK1P04629 796 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 MAPK10P53779 464 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 CRTC3Q6UUV7 619 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 LUZP2Q86TE4 346 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 GPR156Q8NFN8 814 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 OR10G6Q8NH81 332 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 IFNA16P05015 189 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 IL2P60568 153 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 ZBTB49Q6ZSB9 765 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 CHPFQ8IZ52 775 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 KYQ8NBH2 561 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 PAWRQ96IZ0 340 aaKnown RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 RNF145Q96MT1 663 aa13.07□□□□□ -0.32
PTPRK-207ENST00000368226 DDX20Q9UHI6 824 aaKnown RBP13.07□□□□□ -0.32
PTPRK-207ENST00000368226 A0A0A0MRY4 1105 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 TOMM70O94826 608 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 FYNP06241 537 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 CHKAP35790 457 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 KCNA10Q16322 511 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 SNAP47Q5SQN1 464 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 SH3RF1Q7Z6J0 888 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 C2orf73Q8N5S3 287 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-207ENST00000368226 ANKRD52Q8NB46 1076 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 SPATA13Q96N96 652 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 FAM126AQ9BYI3 521 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-207ENST00000368226 ANKDD1BA6NHY2 528 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 MRASO14807 208 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 FGF10O15520 208 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-207ENST00000368226 TLR5O60602 858 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 ADH1AP07327 375 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 ATAD3BQ5T9A4 648 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 FAM151BQ6UXP7 276 aa13.06□□□□□ -0.32
PTPRK-207ENST00000368226 LRRC55Q6ZSA7 311 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms