RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 IRX4P78413 519 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 GFPT1Q06210 699 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 ZNF252P-AS1Q0IIN9 211 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 TBX2Q13207 712 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 SEMA3BQ13214 749 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 ELAVL3Q14576 367 aaKnown RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 POLD3Q15054 466 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 CST6Q15828 149 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 SLC18A3Q16572 532 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 DUOXA1Q1HG43 343 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 RSPO4Q2I0M5 234 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 ASTE1Q2TB18 679 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 TTC31Q49AM3 519 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 BOLA3Q53S33 107 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 DSG4Q86SJ6 1040 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 FAM124AQ86V42 546 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 PSTKQ8IV42 348 aaKnown RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 RGL4Q8IZJ4 473 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 STK40Q8N2I9 435 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 CEP76Q8TAP6 659 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 DNASE2BQ8WZ79 361 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 ARHGEF2Q92974 986 aaKnown RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 CHP1Q99653 195 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 TRIM7Q9C029 511 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 PCED1AQ9H1Q7 454 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 NEUROG2Q9H2A3 272 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 SMOC1Q9H4F8 434 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 CATSPERBQ9H7T0 1116 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 SGK2Q9HBY8 427 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 ATP13A1Q9HD20 1204 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 ABHD10Q9NUJ1 306 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 FBXL12Q9NXK8 326 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 DLL3Q9NYJ7 618 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 PCSK1NQ9UHG2 260 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 EVLQ9UI08 416 aaPredicted RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 HPCAL4Q9UM19 191 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 SLC6A14Q9UN76 642 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 OTOGLQ3ZCN5 2332 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 MYO18AQ92614 2054 aaKnown RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 AKR1B15C9JRZ8 316 aaPredicted RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 K7ERQ8 282 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 MYO1FO00160 1098 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 ALOX15BO15296 676 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 SMAD6O43541 496 aaKnown RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 KDELR3O43731 214 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 GDF9O60383 454 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 RAMP2O60895 175 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 LRCH4O75427 683 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 ADH1BP00325 375 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 VAV1P15498 845 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 GOT1P17174 413 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 GLDCP23378 1020 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 HCAR3P49019 387 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 ZNF135P52742 658 aaPredicted RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 PUM1Q14671 1186 aaKnown RBP eCLIP10.07□□□□□ -0.8
CD48-202ENST00000368046 FAM46CQ5VWP2 391 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 PEAR1Q5VY43 1037 aaPredicted RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 SLC23A3Q6PIS1 610 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 LINGO4Q6UY18 593 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 RABEPKQ7Z6M1 372 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 CACUL1Q86Y37 369 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 CNGA4Q8IV77 575 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 UMODL1-AS1Q8N2C9 162 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 HDDC3Q8N4P3 179 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 RTL3Q8N8U3 475 aaKnown RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 TMIEQ8NEW7 156 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 OR2A12Q8NGT7 310 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 NETO1Q8TDF5 533 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 GANCQ8TET4 914 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 OR8D1Q8WZ84 308 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 RMDN1Q96DB5 314 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 CCDC114Q96M63 670 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 CCDC42Q96M95 316 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 HSPA12BQ96MM6 686 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 OMDQ99983 421 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 RBSNQ9H1K0 784 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 PABPC3Q9H361 631 aaKnown RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 DEF6Q9H4E7 631 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 DHX35Q9H5Z1 703 aaKnown RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 NHEJ1Q9H9Q4 299 aaPredicted RBP10.07□□□□□ -0.8
CD48-202ENST00000368046 IP6K2Q9UHH9 426 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 PPM1HQ9ULR3 514 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 FZD4Q9ULV1 537 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 NENFQ9UMX5 172 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 AP4E1Q9UPM8 1137 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 NEU3Q9UQ49 428 aa10.07□□□□□ -0.8
CD48-202ENST00000368046 GVINP1Q7Z2Y8 2422 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 PATE3B3GLJ2 98 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 EEF2KO00418 725 aaKnown RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 MID1O15344 667 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 FGF10O15520 208 aaPredicted RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 DAPK3O43293 454 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 AKR1B10O60218 316 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 MFAP3LO75121 409 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 RNASEH2AO75792 299 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms