RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 C12orf65Q9H3J6 166 aaKnown RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 MRM3Q9HC36 420 aaKnown RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 ENTPD7Q9NQZ7 604 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 ABI2Q9NYB9 513 aaPredicted RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 CLIC5Q9NZA1 410 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 DCTN4Q9UJW0 460 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 PCDHB7Q9Y5E2 793 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 DOCK4Q8N1I0 1966 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 H2AFYO75367 372 aaKnown RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 DDHD2O94830 711 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 AMHP03971 560 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 APOA4P06727 396 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 NDST2P52849 883 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 KCNJ2P63252 427 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 FPGSQ05932 587 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 BST1Q10588 318 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 OVGP1Q12889 678 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 ILF2Q12905 390 aaKnown RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 PDE1CQ14123 709 aaPredicted RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 PCID2Q5JVF3 399 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 AFMIDQ63HM1 303 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 POTEHQ6S545 545 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 SCD5Q86SK9 330 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 MTDHQ86UE4 582 aaKnown RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 KCNMB4Q86W47 210 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 TP53INP2Q8IXH6 220 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 RFWD2Q8NHY2 731 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 ZSCAN18Q8TBC5 510 aaPredicted RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 C2orf15Q8WU43 125 aaKnown RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 CASP10Q92851 521 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 SKA1Q96BD8 255 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 TBL1YQ9BQ87 522 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 TRIM56Q9BRZ2 755 aaKnown RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 KIFC1Q9BW19 673 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 IL37Q9NZH6 218 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 PPARGC1AQ9UBK2 798 aaKnown RBP14.27□□□□□ -0.12
USF1-202ENST00000368020 SORCS3Q9UPU3 1222 aa14.27□□□□□ -0.12
USF1-202ENST00000368020 ZCWPW2A0A1B0GU75 182 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 A0A1W2PQH9 124 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 E9PAM4 449 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 PLIN3O60664 434 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 CCDC22O60826 627 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 ERVK-10P10266 1014 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 PAMP19021 973 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 PTPN4P29074 926 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 MLLT6P55198 1093 aaPredicted RBP14.27□□□□□ -0.13
USF1-202ENST00000368020 MPP3Q13368 585 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 SWT1Q5T5J6 900 aaKnown RBP14.27□□□□□ -0.13
USF1-202ENST00000368020 TEDDM1Q5T9Z0 273 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 ICE2Q659A1 982 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 ZNF280BQ86YH2 543 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 WDR75Q8IWA0 830 aaKnown RBP14.27□□□□□ -0.13
USF1-202ENST00000368020 ARHGAP12Q8IWW6 846 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 ATP6V0D2Q8N8Y2 350 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 PPP4R1Q8TF05 950 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 BADQ92934 168 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 CEP295NLQ96MC4 621 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 NOD2Q9HC29 1040 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 GLOD4Q9HC38 313 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 HEY2Q9UBP5 337 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 ANKRD6Q9Y2G4 727 aa14.27□□□□□ -0.13
USF1-202ENST00000368020 FAM92AA1XBS5 289 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 H7C4K7 107 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 MAFKO60675 156 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 SERPINE1P05121 402 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 MYL2P10916 166 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 CALB2P22676 271 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 TARSP26639 723 aaKnown RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 TUBP50607 506 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 KPNA1P52294 538 aaPredicted RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 CTXN3Q4LDR2 81 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 VARS2Q5ST30 1063 aaKnown RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 N4BP2L1Q5TBK1 243 aaPredicted RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 STRA8Q7Z7C7 330 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 UMODL1-AS1Q8N2C9 162 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 NETO2Q8NC67 525 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 PPHLN1Q8NEY8 458 aaKnown RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 SPPL2BQ8TCT7 592 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 SLC39A13Q96H72 371 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 MRPL9Q9BYD2 267 aaKnown RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 PRKD2Q9BZL6 878 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 RETREG1Q9H6L5 497 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 KCNK13Q9HB14 408 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 SNX15Q9NRS6 342 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 C20orf96Q9NUD7 363 aaPredicted RBP14.26□□□□□ -0.13
USF1-202ENST00000368020 BAIAP2L1Q9UHR4 511 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 LRFN2Q9ULH4 789 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 VWA8A3KMH1 1905 aa14.26□□□□□ -0.13
USF1-202ENST00000368020 NYNRINQ9P2P1 1898 aaKnown RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 MIA3Q5JRA6 1907 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 HGSO14964 777 aaPredicted RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 KRT16P08779 473 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 EZRP15311 586 aaKnown RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 RHOQP17081 205 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 CCND1P24385 295 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 PRKAA2P54646 552 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 TBX4P57082 545 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 MRPL58Q14197 206 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms