RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 TCP10LQ8TDR4 215 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 KAT5Q92993 513 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 VPS35Q96QK1 796 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 MYH15Q9Y2K3 1946 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 DCXO43602 365 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 CKBP12277 381 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 PCSK2P16519 638 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 TUBA3CQ13748 450 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 POU6F1Q14863 301 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 TRIM40Q6P9F5 258 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 KBTBD2Q8IY47 623 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 NKX2-3Q8TAU0 364 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 PIK3R3Q92569 461 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 ZNF75CPQ92670 426 aaPredicted RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 AIFM2Q9BRQ8 373 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 GMIPQ9P107 970 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 ANKDD1BA6NHY2 528 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 SRRM3A6NNA2 597 aaPredicted RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 COX7A2P14406 83 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 IL27RAQ6UWB1 636 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 GLT6D1Q7Z4J2 308 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 LEF1Q9UJU2 399 aaPredicted RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 MRPS7Q9Y2R9 242 aaKnown RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 FAM25EA8MYX2 175 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 FOXN1O15353 648 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 PSMG1O95456 288 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 GSSP48637 474 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 DPF2Q92785 391 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■□ 24.2
TPR-201ENST00000367478 MTF2Q9Y483 593 aaPredicted RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 ITIH1P19827 911 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 SDC2P34741 201 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 MOXD1Q6UVY6 613 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 PTAR1Q7Z6K3 402 aaPredicted RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 SYTL5Q8TDW5 730 aaPredicted RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
TPR-201ENST00000367478 GNPTGQ9UJJ9 305 aa12.6□□□□□ -0.39
TPR-201ENST00000367478 CYP27B1O15528 508 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 ARF4P18085 180 aaPredicted RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 TYMPP19971 482 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 MAGEA2P43356 314 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 HMGCS2P54868 508 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 EIF5AP63241 154 aaKnown RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 SCRN3Q0VDG4 424 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 FAM171BQ6P995 826 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 SPOCD1Q6ZMY3 1216 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 USP45Q70EL2 814 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 STAG3L4Q8TBR4 150 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 SLC35C2Q9NQQ7 365 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 KANSL3Q9P2N6 904 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 A0A096LPK6 155 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 THP07101 528 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 RPL14P50914 215 aaKnown RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 WDR49Q8IV35 697 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 COLGALT2Q8IYK4 626 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 SPHKAPQ2M3C7 1700 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 JCHAINP01591 159 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 PROCP04070 461 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 URODP06132 367 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 FGFR1P11362 822 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 EIF2S3LQ2VIR3 472 aaKnown RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 FAXCQ5TGI0 409 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 HIPK1Q86Z02 1210 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 CST11Q9H112 138 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 CATSPERZQ9NTU4 200 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 HUNKP57058 714 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 SMIM5Q71RC9 77 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 FBXO25Q8TCJ0 367 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 CIDEBQ9UHD4 219 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 CYB561D2O14569 222 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 PCDH8O95206 1070 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 PAX3P23760 479 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 ST3GAL1Q11201 340 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 BPIFB6Q8NFQ5 453 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 DMGDHQ9UI17 866 aaKnown RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 VPS4AQ9UN37 437 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 PCDHGA3Q9Y5H0 932 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 ERBB3P21860 1342 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 NRF1Q16656 503 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 RFTN2Q52LD8 501 aaPredicted RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 ZNF512BQ96KM6 892 aaPredicted RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 HPS6Q86YV9 775 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.59□□□□□ -0.39
TPR-201ENST00000367478 SIRT2Q8IXJ6 389 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 PPP3R2Q96LZ3 170 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 CCDC115Q96NT0 180 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 RUSC1Q9BVN2 902 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 DNPEPQ9ULA0 475 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
TPR-201ENST00000367478 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms