RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ULBP1Q9BZM6 244 aa15.93■□□□□ 0.14
NUCKS1-201ENST00000367142 C6orf62Q9GZU0 229 aaPredicted RBP15.93■□□□□ 0.14
NUCKS1-201ENST00000367142 LYVE1Q9Y5Y7 322 aa15.93■□□□□ 0.14
NUCKS1-201ENST00000367142 EFCAB10A6NFE3 127 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 CSH1P0DML2 217 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 CSH2P0DML3 217 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 STAT5AP42229 794 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 CDK7P50613 346 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 PRKAG1P54619 331 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 MRPS6P82932 125 aaKnown RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 FIGNQ5HY92 759 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 MZT2AQ6P582 158 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ADGRG2Q8IZP9 1017 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 TRAPPC12Q8WVT3 735 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 INTS7Q9NVH2 962 aaKnown RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 PCDHB9Q9Y5E1 797 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 SNPHO15079 494 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 MAGEC1O60732 1142 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 TBL1XO60907 577 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 PAX3P23760 479 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 RHAGQ02094 409 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ULK2Q8IYT8 1036 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 NKAPQ8N5F7 415 aaKnown RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 PDLIM2Q96JY6 352 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 RNF145Q96MT1 663 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 PRRG4Q9BZD6 226 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ENO4A6NNW6 628 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ENKURQ8TC29 256 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 LRRC39Q96DD0 335 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 REEP1Q9H902 201 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 CORO2BQ9UQ03 480 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 GTPBP1O00178 669 aaKnown RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 DNALI1O14645 258 aaPredicted RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 AKAP3O75969 853 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 CTDNEP1O95476 244 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 FGF19O95750 216 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 FAM58BPP0C7Q3 252 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 HDCP19113 662 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 PTPN4P29074 926 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 GCNT1Q02742 428 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ZSWIM7Q19AV6 140 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 DNAJC14Q6Y2X3 702 aaPredicted RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ZNF571Q7Z3V5 609 aaPredicted RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 HJURPQ8NCD3 748 aaPredicted RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ZNF248Q8NDW4 579 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 SELENOMQ8WWX9 145 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ASB8Q9H765 288 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 THAP1Q9NVV9 213 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 NRCAMQ92823 1304 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 GSAPA4D1B5 854 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 PDE9AO76083 593 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 RFX5P48382 616 aaPredicted RBP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 SCNN1GP51170 649 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 USP41Q3LFD5 358 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 SMYD1Q8NB12 490 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 KLHL25Q9H0H3 589 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 ANGPT4Q9Y264 503 aa15.92■□□□□ 0.14
NUCKS1-201ENST00000367142 CCNDBP1O95273 360 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 POLD2P49005 469 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 AFTPHQ6ULP2 937 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 AHI1Q8N157 1196 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 GAD1Q99259 594 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 OSGEPQ9NPF4 335 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 SLC27A6Q9Y2P4 619 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 PTPN1P18031 435 aaKnown RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 PPM1AP35813 382 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 GPAT3Q53EU6 434 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 TTC23Q5W5X9 447 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 HEATR4Q86WZ0 1026 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 ZSWIM2Q8NEG5 633 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 ASGR1P07306 291 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 NAA20P61599 178 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 OTUD3Q5T2D3 398 aaPredicted RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 RORBQ92753 470 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 FERD3LQ96RJ6 166 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 TTLL2Q9BWV7 592 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 AP3D1O14617 1153 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 RECQL4O94761 1208 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 HMGCRP04035 888 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 RPL9P32969 192 aaKnown RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 BNC1Q01954 994 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 FAM171BQ6P995 826 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 KLHL35Q6PF15 583 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 KIAA0408Q6ZU52 694 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 SEMA4DQ92854 862 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 C18orf25Q96B23 403 aaPredicted RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 RIOX1Q9H6W3 641 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 PTPRUQ92729 1446 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 A0A0B4J269 797 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 RPL4P36578 427 aaKnown RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 PARP6Q2NL67 630 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 TRMT5Q32P41 509 aaKnown RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 INO80DQ53TQ3 878 aaPredicted RBP15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 RAP1GAP2Q684P5 730 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 CYLDQ9NQC7 956 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 KBTBD4Q9NVX7 518 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 KLQ9UEF7 1012 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms