RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 APOFQ13790 326 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 TREML2Q5T2D2 321 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 TMEM110Q86TL2 294 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 TRIML2Q8N7C3 387 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 ZFRQ96KR1 1074 aaKnown RBP13.82□□□□□ -0.2
PRKN-205ENST00000366897 GPR20Q99678 358 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 SLC29A1Q99808 456 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PRPF19Q9UMS4 504 aaKnown RBP13.82□□□□□ -0.2
PRKN-205ENST00000366897 ZNF638Q14966 1978 aaKnown RBP13.82□□□□□ -0.2
PRKN-205ENST00000366897 NUP205Q92621 2012 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PRSS51A0A1B0GVH4 220 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 TMX2-CTNND1H3BSU7 103 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 STRNO43815 780 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 SBK3P0C264 359 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PSMC3P17980 439 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PPARGP37231 505 aaPredicted RBP13.82□□□□□ -0.2
PRKN-205ENST00000366897 NR2C2P49116 596 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 OAZ1P54368 228 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PRAMEP78395 509 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 TNFAIP1Q13829 316 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 GRM3Q14832 879 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 MGAT5BQ3V5L5 792 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PKDCCQ504Y2 493 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PITRM1Q5JRX3 1037 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 GRTP1Q5TC63 336 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 TRIM67Q6ZTA4 783 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 CYS1Q717R9 158 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 ZBTB46Q86UZ6 589 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 PNPLA1Q8N8W4 532 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 TMEM102Q8N9M5 508 aaPredicted RBP13.82□□□□□ -0.2
PRKN-205ENST00000366897 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRKN-205ENST00000366897 ADCY4Q8NFM4 1077 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 VPS39Q96JC1 886 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 CIB1Q99828 191 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 VANGL2Q9ULK5 521 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 COPG1Q9Y678 874 aaKnown RBP13.82□□□□□ -0.2
PRKN-205ENST00000366897 USP3Q9Y6I4 520 aa13.82□□□□□ -0.2
PRKN-205ENST00000366897 NEMP2A6NFY4 417 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 KPNA7A9QM74 516 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 MLNP12872 115 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 CKMT2P17540 419 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 MPP3Q13368 585 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 PTK2BQ14289 1009 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 DCAF6Q58WW2 860 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 ZNF280DQ6N043 979 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 FBXO16Q8IX29 292 aaPredicted RBP13.81□□□□□ -0.2
PRKN-205ENST00000366897 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 TSPAN14Q8NG11 270 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 SPATA33Q96N06 139 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 APBA2Q99767 749 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 TRPV6Q9H1D0 765 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 OXSMQ9NWU1 459 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 AKT3Q9Y243 479 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 SNX13Q9Y5W8 968 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 RLFQ13129 1914 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 LCTP09848 1927 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 IGKV6-21A0A0C4DH24 114 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 ZCWPW2A0A1B0GU75 182 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 ZFXP17010 805 aaPredicted RBP13.81□□□□□ -0.2
PRKN-205ENST00000366897 LMO2P25791 158 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 RBP5P82980 135 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 KIZQ2M2Z5 673 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 MTX3Q5HYI7 312 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 ZNF618Q5T7W0 954 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 C4orf22Q6V702 233 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 DEFB106AQ8N104 65 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 RP9Q8TA86 221 aaKnown RBP13.81□□□□□ -0.2
PRKN-205ENST00000366897 C18orf25Q96B23 403 aaPredicted RBP13.81□□□□□ -0.2
PRKN-205ENST00000366897 SLC39A3Q9BRY0 314 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 ARHGEF37A1IGU5 675 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 TCAF2A6NFQ2 919 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 FAM72CH0Y354 149 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 ACOT8O14734 319 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.24e-9■■■■■ 41.8
PRKN-205ENST00000366897 ZNF26P17031 533 aaPredicted RBP13.81□□□□□ -0.2
PRKN-205ENST00000366897 DESP17661 470 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 NUMBP49757 651 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 SULT1E1P49888 294 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 NR1H2P55055 460 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 DGKDQ16760 1214 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 FAM72AQ5TYM5 149 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 FAM72DQ6L9T8 149 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 KLC3Q6P597 504 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 FAM72BQ86X60 149 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 PGAM4Q8N0Y7 254 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 RNF139Q8WU17 664 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 AS3MTQ9HBK9 375 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 TUBGCP4Q9UGJ1 667 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 RUVBL2Q9Y230 463 aaKnown RBP13.81□□□□□ -0.2
PRKN-205ENST00000366897 CDYLQ9Y232 598 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 RAP2CQ9Y3L5 183 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 TLL2Q9Y6L7 1015 aa13.81□□□□□ -0.2
PRKN-205ENST00000366897 E7ENX8 843 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 BCAS2O75934 225 aaPredicted RBP13.8□□□□□ -0.2
PRKN-205ENST00000366897 HNRNPCP07910 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKN-205ENST00000366897 NMBRP28336 390 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 ATICP31939 592 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 NDST2P52849 883 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 METTL21CQ5VZV1 264 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms