RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 ATP11CQ8NB49 1132 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 C10orf82Q8WW14 230 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 CCDC114Q96M63 670 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 KLHL5Q96PQ7 755 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 GLOD4Q9HC38 313 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 INSL5Q9Y5Q6 135 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 VCANP13611 3396 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 TMEM120BA0PK00 339 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 TADA2AO75478 443 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 CNPP09543 421 aaKnown RBP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 CCNB1P14635 433 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 RPL17P18621 184 aaKnown RBP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 PARP15Q460N3 678 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 FSCBQ5H9T9 825 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 MPP7Q5T2T1 576 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 CCDC33Q8N5R6 958 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 C2CD4AQ8NCU7 369 aaPredicted RBP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 FAM131CQ96AQ9 280 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 ZBED2Q9BTP6 218 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 ZYG11BQ9C0D3 744 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 PLLPQ9Y342 182 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 H7C0S8 307 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 SNX3O60493 162 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 T-ENOLP0DO92 83 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 NFKB1P19838 968 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 GRIK1P39086 918 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 CSNK1DP48730 415 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 HNRNPH2P55795 449 aaKnown RBP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 DLG1Q12959 904 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 HLTFQ14527 1009 aaKnown RBP eCLIP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 TYSND1Q2T9J0 566 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 PPP6R3Q5H9R7 873 aaPredicted RBP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 TMEM207Q6UWW9 146 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 SLC26A11Q86WA9 606 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 CCNJLQ8IV13 435 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 PDCD7Q8N8D1 485 aaKnown RBP9.47□□□□□ -0.89
CNIH4-202ENST00000366857 SPPL3Q8TCT6 385 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 ECHDC3Q96DC8 303 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 MED10Q9BTT4 135 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 SLC25A51Q9H1U9 297 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 SP110Q9HB58 689 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 SLC17A7Q9P2U7 560 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 HCN2Q9UL51 889 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 STARD13Q9Y3M8 1113 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 HEY1Q9Y5J3 304 aa9.47□□□□□ -0.89
CNIH4-202ENST00000366857 TRIOO75962 3097 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 GMNCA6NCL1 334 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 TM9SF1O15321 606 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 MTSS1O43312 755 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 LPXNO60711 386 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 PIAS1O75925 651 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 EPOP01588 193 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 DLDP09622 509 aaKnown RBP9.46□□□□□ -0.89
CNIH4-202ENST00000366857 ALADP13716 330 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 LAG3P18627 525 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 ZNF140P52738 457 aaPredicted RBP9.46□□□□□ -0.89
CNIH4-202ENST00000366857 CYHR1Q6ZMK1 362 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 PDZD8Q8NEN9 1154 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 UBXN10Q96LJ8 280 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 LRRC3BQ96PB8 259 aa9.46□□□□□ -0.89
CNIH4-202ENST00000366857 TLR8Q9NR97 1041 aaKnown RBP9.46□□□□□ -0.89
CNIH4-202ENST00000366857 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.46□□□□□ -0.89
CNIH4-202ENST00000366857 GM2AP17900 193 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 TACR2P21452 398 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 FCARP24071 287 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 NSUN2Q08J23 767 aaKnown RBP eCLIP9.46□□□□□ -0.9
CNIH4-202ENST00000366857 SLC10A7Q0GE19 358 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 SPANXN3Q5MJ09 141 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 MBLAC2Q68D91 279 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 ASTLQ6HA08 431 aaPredicted RBP9.46□□□□□ -0.9
CNIH4-202ENST00000366857 GPR22Q99680 433 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 RBBP8Q99708 897 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 ACBD3Q9H3P7 528 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 DNAJC17Q9NVM6 304 aaKnown RBP9.46□□□□□ -0.9
CNIH4-202ENST00000366857 ABI2Q9NYB9 513 aaPredicted RBP9.46□□□□□ -0.9
CNIH4-202ENST00000366857 MPP6Q9NZW5 540 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 SENP1Q9P0U3 644 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 CLEC4EQ9ULY5 219 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 FGF3P11487 239 aaPredicted RBP9.46□□□□□ -0.9
CNIH4-202ENST00000366857 CDR1P51861 262 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 USP4Q13107 963 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 PDE1CQ14123 709 aaPredicted RBP9.46□□□□□ -0.9
CNIH4-202ENST00000366857 ITIH4Q14624 930 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 FAXCQ5TGI0 409 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 PACS1Q6VY07 963 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 RAB3IL1Q8TBN0 382 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 DEPDC1BQ8WUY9 529 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 CD248Q9HCU0 757 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
CNIH4-202ENST00000366857 A0A0D9SEW6 157 aa9.45□□□□□ -0.9
CNIH4-202ENST00000366857 ACSL4O60488 711 aa9.45□□□□□ -0.9
CNIH4-202ENST00000366857 EDF1O60869 148 aaKnown RBP9.45□□□□□ -0.9
CNIH4-202ENST00000366857 TGDSO95455 350 aa9.45□□□□□ -0.9
CNIH4-202ENST00000366857 GJC1P36383 396 aa9.45□□□□□ -0.9
CNIH4-202ENST00000366857 TBX4P57082 545 aa9.45□□□□□ -0.9
CNIH4-202ENST00000366857 SEMA3AQ14563 771 aa9.45□□□□□ -0.9
CNIH4-202ENST00000366857 ANKRD20A4Q4UJ75 823 aa9.45□□□□□ -0.9
CNIH4-202ENST00000366857 SETD3Q86TU7 594 aaPredicted RBP9.45□□□□□ -0.9
CNIH4-202ENST00000366857 CENPLQ8N0S6 344 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms