RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SH2D5Q6ZV89 423 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 FAM183BPQ6ZVS7 135 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 MOB2Q70IA6 237 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 ARMCX2Q7L311 632 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 IGDCC3Q8IVU1 814 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 PDIK1LQ8N165 341 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 TOP6BLQ8N6T0 577 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 SHCBP1Q8NEM2 672 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RXFP2Q8WXD0 754 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 USP6NLQ92738 828 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 DIO2Q92813 273 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RTP4Q96DX8 246 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 HSPBAP1Q96EW2 488 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 SARGQ9BW04 601 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 CALN1Q9BXU9 219 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 DPP3Q9NY33 737 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 TSPAN16Q9UKR8 245 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 TEX264Q9Y6I9 313 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 COL1A2P08123 1366 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 PLXNA1Q9UIW2 1896 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 E5RJQ4 531 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 HGSO14964 777 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 TSPAN1O60635 241 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 LTFP02788 710 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 SLC8A1P32418 973 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RDXP35241 583 aaKnown RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RBP5P82980 135 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RNASELQ05823 741 aaKnown RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 CCDC14Q49A88 953 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 FAM47CQ5HY64 1035 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 C1orf228Q6PIY5 440 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 LVRNQ6Q4G3 990 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 PALM2Q8IXS6 379 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 TTC39CQ8N584 583 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 BANPQ8N9N5 519 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 KLHL29Q96CT2 875 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RNF157Q96PX1 679 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 C16orf70Q9BSU1 422 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 ATXN3LQ9H3M9 355 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 CHKBQ9Y259 395 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 CHADO15335 359 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 C1QAP02745 245 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 VTNP04004 478 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 KRT16P08779 473 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 SEPHS1P49903 392 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 CDH6P55285 790 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 ROR1Q01973 937 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 C15orf59Q2T9L4 293 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 GJC2Q5T442 439 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 MTHFD1LQ6UB35 978 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 FASTKD5Q7L8L6 764 aaKnown RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 MAMDC2Q7Z304 686 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 VSIG1Q86XK7 387 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 CHST14Q8NCH0 376 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 PPTC7Q8NI37 304 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 C10orf82Q8WW14 230 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 ZNF75CPQ92670 426 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 TEKT5Q96M29 485 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 ACAP3Q96P50 834 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 MYLK2Q9H1R3 596 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 USH1CQ9Y6N9 552 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 TM9SF1O15321 606 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 PIAS1O75925 651 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 ELK3P41970 407 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 MSH2P43246 934 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 BASP1P80723 227 aaKnown RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 SRSF2Q01130 221 aaKnown RBP7.53□□□□□ -1.2
CLCN3-202ENST00000360642 TFDP2Q14188 446 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 PDK2Q15119 407 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 SPDYAQ5MJ70 313 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 MARCH8Q5T0T0 291 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 OLFML1Q6UWY5 402 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 OTOAQ7RTW8 1153 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 TMEM110Q86TL2 294 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 PQLC3Q8N755 202 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 PLD5Q8N7P1 536 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 C12orf29Q8N999 325 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 DTWD2Q8NBA8 298 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 LRRC8CQ8TDW0 803 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 AFG1LQ8WV93 481 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 TEKT4Q8WW24 435 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 OPTNQ96CV9 577 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 KATNBL1Q9H079 304 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 MIS12Q9H081 205 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 PNPLA8Q9NP80 782 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 NME7Q9Y5B8 376 aa7.53□□□□□ -1.2
CLCN3-202ENST00000360642 TCRBV9S1A1TA0A576 114 aa7.52□□□□□ -1.21
CLCN3-202ENST00000360642 PRPSAP2O60256 369 aa7.52□□□□□ -1.21
CLCN3-202ENST00000360642 FAM155BO75949 473 aa7.52□□□□□ -1.21
CLCN3-202ENST00000360642 LRIG2O94898 1065 aa7.52□□□□□ -1.21
CLCN3-202ENST00000360642 DHRS4L1P0CG22 281 aa7.52□□□□□ -1.21
CLCN3-202ENST00000360642 MAGEA6P43360 314 aa7.52□□□□□ -1.21
CLCN3-202ENST00000360642 R3HDM1Q15032 1099 aaKnown RBP7.52□□□□□ -1.21
CLCN3-202ENST00000360642 STILQ15468 1287 aa7.52□□□□□ -1.21
CLCN3-202ENST00000360642 BOLA3Q53S33 107 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms