RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ERVK-18Q9QC07 812 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 NCAM2O15394 837 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 CST8O60676 142 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 CLEC3AO75596 197 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 RLN1P04808 185 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 DHPSP49366 369 aaPredicted RBP9.9□□□□□ -0.83
CHD3-202ENST00000358181 STAT4Q14765 748 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 STILQ15468 1287 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 SNX20Q7Z614 316 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 FMR1NBQ8N0W7 255 aaPredicted RBP9.9□□□□□ -0.83
CHD3-202ENST00000358181 C8orf4Q9NR00 106 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 TUBE1Q9UJT0 475 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 RPS6KL1Q9Y6S9 549 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 H3BUI4 141 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 O00370 1275 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 ZBTB14O43829 449 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 KLHL41O60662 606 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 BMPR2Q13873 1038 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 ILDR2Q71H61 639 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 STRA8Q7Z7C7 330 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 MNTQ99583 582 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 A1CFQ9NQ94 594 aaKnown RBP9.9□□□□□ -0.83
CHD3-202ENST00000358181 POU2F3Q9UKI9 436 aa9.9□□□□□ -0.83
CHD3-202ENST00000358181 SPHKAPQ2M3C7 1700 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 RAD51BO15315 384 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 IFNA6P05013 189 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 SOX10P56693 466 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 PSMD5Q16401 504 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 GTF2IRD2BQ6EKJ0 949 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 ENOSF1Q7L5Y1 443 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 RASGRP2Q7LDG7 609 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 SLFN11Q7Z7L1 901 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 GTF2IRD2Q86UP8 949 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 BOLLQ8N9W6 283 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 OVCA2Q8WZ82 227 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 EHD3Q9NZN3 535 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 PAK5Q9P286 719 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 PFASO15067 1338 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 A2ML1A8K2U0 1454 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 TRAV19A0A0A6YYK7 116 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 TMEM114B3SHH9 223 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 ASNA1O43681 348 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 HLA-DRAP01903 254 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 CDH8P55286 799 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 IKBKEQ14164 716 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 RAB39AQ14964 217 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 NEDD8Q15843 81 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 XKR4Q5GH76 650 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 MILR1Q7Z6M3 343 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 ADAM32Q8TC27 787 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 RNPC3Q96LT9 517 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 FAM20AQ96MK3 541 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 CHP1Q99653 195 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 STRA6Q9BX79 667 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 MARCH7Q9H992 704 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 FKBP14Q9NWM8 211 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 ZNF521Q96K83 1311 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 BCORL1Q5H9F3 1711 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 A8MU76 341 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 CHRNGP07510 517 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 DBTP11182 482 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 NR0B1P51843 470 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 HK2P52789 917 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 BYSLQ13895 437 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 USP49Q70CQ1 688 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 TEKT5Q96M29 485 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 DDX43Q9NXZ2 648 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 GRID1Q9ULK0 1009 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 USP15Q9Y4E8 981 aaPredicted RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 CDY2AQ9Y6F7 541 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 CDY1Q9Y6F8 540 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 LRATO95237 230 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 SCGB1D2O95969 90 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 GEMIN4P57678 1058 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 KCNA10Q16322 511 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 ZNF613Q6PF04 617 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 GHDCQ8N2G8 530 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 OSMRQ99650 979 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 IMP3Q9NV31 184 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 IKZF2Q9UKS7 526 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 CYB5AP00167 134 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 ITIH2P19823 946 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 TARSP26639 723 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 CLCN3P51790 818 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 BDH1Q02338 343 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 FMR1Q06787 632 aaKnown RBP eCLIP9.89□□□□□ -0.832e-6■■□□□ 13.5
CHD3-202ENST00000358181 OCLNQ16625 522 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 XKR3Q5GH77 459 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 DEF8Q6ZN54 512 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 DNAAF5Q86Y56 855 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 CADM2Q8N3J6 435 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 DTNBP1Q96EV8 351 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 EPYCQ99645 322 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 HTATIP2Q9BUP3 242 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 ATXN2Q99700 1313 aaKnown RBP9.89□□□□□ -0.83
CHD3-202ENST00000358181 TECPR2O15040 1411 aa9.89□□□□□ -0.83
CHD3-202ENST00000358181 RHOBTB3O94955 611 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms