RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 C1QTNF1Q9BXJ1 281 aa12.32□□□□□ -0.44
SMARCAL1-201ENST00000357276 MRPL40Q9NQ50 206 aaKnown RBP12.32□□□□□ -0.44
SMARCAL1-201ENST00000357276 ZNF219Q9P2Y4 722 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-201ENST00000357276 USP3Q9Y6I4 520 aa12.32□□□□□ -0.44
SMARCAL1-201ENST00000357276 BAIAP3O94812 1187 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 VDRP11473 427 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ATXN3P54252 364 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PRKAA1Q13131 559 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 LRP8Q14114 963 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 KIZQ2M2Z5 673 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 C6orf10Q5SRN2 563 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 LIPMQ5VYY2 423 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PACRGLQ8N7B6 248 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ZSCAN18Q8TBC5 510 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ZBED3Q96IU2 234 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CORO1BQ9BR76 489 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 MRPL4Q9BYD3 311 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PTPRHQ9HD43 1115 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 DTLQ9NZJ0 730 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CROCCQ5TZA2 2017 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 A0A096LPK6 155 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 TARM1B6A8C7 271 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 NEMP1O14524 444 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PAPSS1O43252 624 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CSPG5O95196 566 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HOXD12P35452 270 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CCR3P51677 355 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PSME3P61289 254 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 BAATQ14032 418 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ARL13AQ5H913 290 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 GRAMD4Q6IC98 578 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CASC4Q6P4E1 433 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CHSY3Q70JA7 882 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 EEPD1Q7L9B9 569 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ZBTB33Q86T24 672 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CPNE9Q8IYJ1 553 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 FAM47BQ8NA70 645 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HMGCLL1Q8TB92 370 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 SREK1Q8WXA9 508 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PPP1R10Q96QC0 940 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 TDRD1Q9BXT4 1180 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 BRD8Q9H0E9 1235 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ARMC1Q9NVT9 282 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HACD3Q9P035 362 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ZNF70Q9UC06 446 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CDYLQ9Y232 598 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 FADS3Q9Y5Q0 445 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 TRIP11Q15643 1979 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 E2F8A0AVK6 867 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HTR3EA5X5Y0 456 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HACD1B0YJ81 288 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 POLBP06746 335 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ASNSP08243 561 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 RPS12P25398 132 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PSMD7P51665 324 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ESRRGP62508 458 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PPIL2Q13356 520 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 NCBP2-AS2Q69YL0 99 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HEATR6Q6AI08 1181 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 FASTKD5Q7L8L6 764 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 AGR3Q8TD06 166 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 ABHD8Q96I13 439 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CNDP2Q96KP4 475 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 PCDHAC1Q9H158 963 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 CNOT6Q9ULM6 557 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 HES2Q9Y543 173 aa12.31□□□□□ -0.44
SMARCAL1-201ENST00000357276 E7ENX8 843 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 SOCS2O14508 198 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 PIGNO95427 931 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 C2P06681 752 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 APOA4P06727 396 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 TTKP33981 857 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 CCR10P46092 362 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 GRIA4P48058 902 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 EFNA5P52803 228 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 INTS11Q5TA45 600 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 NIPAL1Q6NVV3 410 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 LCLAT1Q6UWP7 414 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 TMEM135Q86UB9 458 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 COLGALT2Q8IYK4 626 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 CENPSQ8N2Z9 138 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 TNIP2Q8NFZ5 429 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 AFG1LQ8WV93 481 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 MOCOSQ96EN8 888 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 CIB1Q99828 191 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 FTHL17Q9BXU8 183 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 MYO18AQ92614 2054 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 FNDC1Q4ZHG4 1894 aaPredicted RBP12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 E2F6O75461 281 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 TNNC2P02585 160 aa12.3□□□□□ -0.44
SMARCAL1-201ENST00000357276 RPL10P27635 214 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms