RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 EXT2Q93063 718 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 RFKQ969G6 155 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 S100A14Q9HCY8 104 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SPATA2Q9UM82 520 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 NPPAP01160 153 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 BGNP21810 368 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 GPSM2P81274 684 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TTMPQ5BVD1 217 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CNSTQ6PJW8 725 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SLFN11Q7Z7L1 901 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 C4orf19Q8IY42 314 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 POC5Q8NA72 575 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 RPRD1AQ96P16 312 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CLN6Q9NWW5 311 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CMTM6Q9NX76 183 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 COMMD9Q9P000 198 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ARHGAP23Q9P227 1491 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 KBTBD13C9JR72 458 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ADGRB1O14514 1584 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 DFNA5O60443 496 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CBX6O95503 412 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 BTKQ06187 659 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PABPC1LQ4VXU2 614 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PAGE2Q7Z2X7 111 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 KLF6Q99612 283 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ARHGAP20Q9P2F6 1191 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 GPR75-ASB3A0A0A6YYF3 556 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 C6orf222P0C671 652 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 STX4Q12846 297 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZBED5Q49AG3 693 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 LIPMQ5VYY2 423 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TMC7Q7Z402 723 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 HTR3CQ8WXA8 447 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SLC35C1Q96A29 364 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TRIM2Q9C040 744 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PTPRMP28827 1452 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ROBO2Q9HCK4 1378 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 FAM189A1O60320 539 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PIK3CBP42338 1070 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CDK9P50750 372 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PLCL1Q15111 1095 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 NEDD8Q15843 81 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PTRHD1Q6GMV3 140 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 DPY19L2Q6NUT2 758 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SCARA5Q6ZMJ2 495 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 IFNEQ86WN2 208 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 RELL1Q8IUW5 271 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 STAG3L4Q8TBR4 150 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ERMAPQ96PL5 475 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF341Q9BYN7 854 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 HOXA2O43364 376 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 MRPS14O60783 128 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 KCNH1O95259 989 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CALCAP01258 141 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CYP3A4P08684 503 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 COX4I1P13073 169 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PTPN7P35236 360 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ANTXR2P58335 489 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PHF13Q86YI8 300 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZFC3H1O60293 1989 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 DOCK11Q5JSL3 2073 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 AQP12BA6NM10 295 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 UBXN8O00124 270 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 FOXN3O00409 490 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 NBNO60934 754 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PEX14O75381 377 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 LTA4HP09960 611 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PTPN11Q06124 597 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TRAF2Q12933 501 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CRY1Q16526 586 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF484Q5JVG2 852 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 KCNMB4Q86W47 210 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 AQP12AQ8IXF9 295 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SUN5Q8TC36 379 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CSGALNACT1Q8TDX6 532 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 RIT1Q92963 219 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 LENG9Q96B70 501 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SIK3Q9Y2K2 1263 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 VWDEQ8N2E2 1590 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SIGLEC16A6NMB1 481 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SLC25A27O95847 323 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 AKR1B1P15121 316 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 HOXA13P31271 388 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 GUCY1A2P33402 732 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 LHX1P48742 406 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TTPAP49638 278 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF143P52747 638 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 KRT33BQ14525 404 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 NDUFA9Q16795 377 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF829Q3KNS6 432 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TWF2Q6IBS0 349 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TRIM40Q6P9F5 258 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 HEXDCQ8WVB3 486 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 SPATA33Q96N06 139 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF638Q14966 1978 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PCNX2A6NKB5 2137 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ARHGEF7Q14155 803 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 MYBPC3Q14896 1274 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 DSTYKQ6XUX3 929 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms