RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ABCA6Q8N139 1617 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 USP32Q8NFA0 1604 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 POLR1AO95602 1720 aaPredicted RBP6.56□□□□□ -1.36
UPF2-201ENST00000356352 ASGR1P07306 291 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 WEE1P30291 646 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 CLCN5P51795 746 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 RALGDSQ12967 914 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 PPP1R15BQ5SWA1 713 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 CES5AQ6NT32 575 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 FBXO42Q6P3S6 717 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 GALNT18Q6P9A2 607 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 ZNF549Q6P9A3 640 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 CHPFQ8IZ52 775 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 ZCCHC9Q8N567 271 aaKnown RBP6.56□□□□□ -1.36
UPF2-201ENST00000356352 RDH11Q8TC12 318 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 HEXDCQ8WVB3 486 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 ZNF606Q8WXB4 792 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 EDEM1Q92611 657 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 NELL1Q92832 810 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 MYDGFQ969H8 173 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 FAM136AQ96C01 138 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 PPP3R2Q96LZ3 170 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 TEKT5Q96M29 485 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 REXO4Q9GZR2 422 aaKnown RBP6.56□□□□□ -1.36
UPF2-201ENST00000356352 KCNQ5Q9NR82 932 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 FBXO28Q9NVF7 368 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 HPSEQ9Y251 543 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
UPF2-201ENST00000356352 LTFP02788 710 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 IL1R1P14778 569 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 FMO4P31512 558 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ATP5C1P36542 298 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 TTPAP49638 278 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 CCR4P51679 360 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 SLC39A12Q504Y0 691 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ZNF621Q6ZSS3 439 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 R3HCC1LQ7Z5L2 792 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 TFAP2DQ7Z6R9 452 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 UXS1Q8NBZ7 420 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ZNF248Q8NDW4 579 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 FBXO25Q8TCJ0 367 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 SNRNP27Q8WVK2 155 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 SPACA7Q96KW9 195 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 TBCDQ9BTW9 1192 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ZDHHC6Q9H6R6 413 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 SOHLH2Q9NX45 425 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 COMMD9Q9P000 198 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 CPA4Q9UI42 421 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 MSRAQ9UJ68 235 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 DNMT3LQ9UJW3 386 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 MRTO4Q9UKD2 239 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 VPS4AQ9UN37 437 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 CAPN6Q9Y6Q1 641 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 FCHO1O14526 889 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 AKAP3O75969 853 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 VAPBO95292 243 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 MAP3K6O95382 1288 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 OGNP20774 298 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 NOS2P35228 1153 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 CLK2P49760 499 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 TNK2Q07912 1038 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 LGALS3BPQ08380 585 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 STXBP5Q5T5C0 1151 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 CDKAL1Q5VV42 579 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 FAM46CQ5VWP2 391 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ZDHHC20Q5W0Z9 365 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 LIN54Q6MZP7 749 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 DOK6Q6PKX4 331 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 RPTNQ6XPR3 784 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 STK32CQ86UX6 486 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 DEFB106AQ8N104 65 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 EIF1ADQ8N9N8 165 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 ZSCAN18Q8TBC5 510 aaPredicted RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 MYLPFQ96A32 169 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 RERGQ96A58 199 aaPredicted RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 PRMT6Q96LA8 375 aaPredicted RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 POP1Q99575 1024 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 FAM192AQ9GZU8 254 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 MTFR1LQ9H019 292 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 INTS7Q9NVH2 962 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 BTBD7Q9P203 1132 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 MAP10Q9P2G4 905 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 FAM50BQ9Y247 325 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 CHD1O14646 1710 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ZSCAN5CA6NGD5 496 aaPredicted RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 KPNA3O00505 521 aaPredicted RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 SLC25A12O75746 678 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ZCCHC18P0CG32 403 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 AMD1P17707 334 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 ITPK1Q13572 414 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 GRM3Q14832 879 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 PTGES3Q15185 160 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 HYIQ5T013 277 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 TRAPPC5Q8IUR0 188 aa6.55□□□□□ -1.36
UPF2-201ENST00000356352 PSTKQ8IV42 348 aaKnown RBP6.55□□□□□ -1.36
UPF2-201ENST00000356352 MAP4K3Q8IVH8 894 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms