RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 TKTL1P51854 596 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 DAOAP59103 153 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 SLC25A11Q02978 314 aaKnown RBP10.31□□□□□ -0.76
SYNE1-203ENST00000354674 ASPHQ12797 758 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 RALGDSQ12967 914 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 DAB2IPQ5VWQ8 1189 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 TTC27Q6P3X3 843 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 KATNAL2Q8IYT4 538 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 TAB3Q8N5C8 712 aaPredicted RBP10.31□□□□□ -0.76
SYNE1-203ENST00000354674 OR6Y1Q8NGX8 325 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 RXFP2Q8WXD0 754 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 IRGQQ8WZA9 623 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 ASIC3Q9UHC3 531 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 COQ6Q9Y2Z9 468 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 PCDHB5Q9Y5E4 795 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 CCDC188H7C350 402 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 TRMUO75648 421 aaKnown RBP10.31□□□□□ -0.76
SYNE1-203ENST00000354674 ATP5HO75947 161 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 KITP10721 976 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 TCF4P15884 667 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 PDGFRAP16234 1089 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 CYP2F1P24903 491 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 RPA3P35244 121 aaPredicted RBP10.31□□□□□ -0.76
SYNE1-203ENST00000354674 PDE1BQ01064 536 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 OTOAQ7RTW8 1153 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 HERC6Q8IVU3 1022 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 C1orf54Q8WWF1 131 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 LZICQ8WZA0 190 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 PPP2R3CQ969Q6 453 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 RAD9AQ99638 391 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 CCT7Q99832 543 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 SLITRK6Q9H5Y7 841 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 LRRC4Q9HBW1 653 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 FAIMQ9NVQ4 179 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 PTTG2Q9NZH5 202 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 IL37Q9NZH6 218 aa10.31□□□□□ -0.76
SYNE1-203ENST00000354674 HBS1LQ9Y450 684 aaKnown RBP10.31□□□□□ -0.76
SYNE1-203ENST00000354674 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.31□□□□□ -0.76
SYNE1-203ENST00000354674 C15orf38-AP3S2A0A0A6YYH1 394 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 MTMR11A4FU01 709 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 ZBBXA8MT70 800 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 J3QRK9 145 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 DAB1O75553 588 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 TFAP2AP05549 437 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 OCM2P0CE71 109 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 OCMP0CE72 109 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 SYN1P17600 705 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 PPM1AP35813 382 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 RABGGTBP53611 331 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 CLUL1Q15846 466 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 PRSS55Q6UWB4 352 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 PRR23CQ6ZRP0 262 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 ARPINQ7Z6K5 226 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 AMIGO2Q86SJ2 522 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 FBXO22Q8NEZ5 403 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 SEC14L1Q92503 715 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 FBXL8Q96CD0 374 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 ULBP1Q9BZM6 244 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 CYP4F11Q9HBI6 524 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 AAASQ9NRG9 546 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 MARCOQ9UEW3 520 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 ANGPTL2Q9UKU9 493 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 TMED5Q9Y3A6 229 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 FAM32AQ9Y421 112 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 PCDHGA3Q9Y5H0 932 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 PLXNA3P51805 1871 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 LILRB3O75022 631 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 ENDOD1O94919 500 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 FYNP06241 537 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 PMLP29590 882 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 NKX2-5P52952 324 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 SLC5A3P53794 718 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 VCPP55072 806 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 TGFBIQ15582 683 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 GSTA3Q16772 222 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 CMPK2Q5EBM0 449 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 SPOUT1Q5T280 376 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 CCDC137Q6PK04 289 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 CYP4V2Q6ZWL3 525 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 BEND5Q7L4P6 421 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 LRRC6Q86X45 466 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 SIX6OS1Q8N1H7 587 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 FIBCD1Q8N539 461 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 SPPL2BQ8TCT7 592 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 GRIN3AQ8TCU5 1115 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 PANX3Q96QZ0 392 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 XAB2Q9HCS7 855 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 DDX56Q9NY93 547 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 ZNF212Q9UDV6 495 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 GRAP2O75791 330 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 CSPG5O95196 566 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 ZBED1O96006 694 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 FUCA1P04066 466 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 RPL10P27635 214 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 MATKP42679 507 aa10.3□□□□□ -0.76
SYNE1-203ENST00000354674 YWHAZP63104 245 aaKnown RBP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 NSUN2Q08J23 767 aaKnown RBP eCLIP10.3□□□□□ -0.76
SYNE1-203ENST00000354674 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms