RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PSEN1P49768 467 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 NUDT2P50583 147 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 LBRQ14739 615 aaKnown RBP19.91■□□□□ 0.78
COL13A1-201ENST00000354547 EPGNQ6UW88 154 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 USP50Q70EL3 339 aaPredicted RBP19.91■□□□□ 0.78
COL13A1-201ENST00000354547 LIMS2Q7Z4I7 341 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 CCNYL1Q8N7R7 359 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 SPDYE1Q8NFV5 336 aaPredicted RBP19.91■□□□□ 0.78
COL13A1-201ENST00000354547 EPAS1Q99814 870 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 FTHL17Q9BXU8 183 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 STN1Q9H668 368 aaKnown RBP19.91■□□□□ 0.78
COL13A1-201ENST00000354547 FLRT1Q9NZU1 646 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 BDNFP23560 247 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 GRIA4P48058 902 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 KCTD11Q693B1 232 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 DHDDSQ86SQ9 333 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 SREK1Q8WXA9 508 aaKnown RBP19.91■□□□□ 0.78
COL13A1-201ENST00000354547 GATA6Q92908 595 aa19.91■□□□□ 0.78
COL13A1-201ENST00000354547 TXNDC9O14530 226 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 FKBP6O75344 327 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 VAPBO95292 243 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 PIGNO95427 931 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 PEX2P28328 305 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 MPP1Q00013 466 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 SEMA3BQ13214 749 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 XKR4Q5GH76 650 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 TMCO4Q5TGY1 634 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 CNTD1Q8N815 330 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 PPP1R10Q96QC0 940 aaKnown RBP19.9■□□□□ 0.78
COL13A1-201ENST00000354547 TUBGCP5Q96RT8 1024 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 ILKAPQ9H0C8 392 aaPredicted RBP19.9■□□□□ 0.78
COL13A1-201ENST00000354547 GABRDO14764 452 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 MPOP05164 745 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 RAG1P15918 1043 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 CDK7P50613 346 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 TRIP10Q15642 601 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 PDCD2Q16342 344 aaPredicted RBP19.9■□□□□ 0.78
COL13A1-201ENST00000354547 SFT2D3Q587I9 215 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 ARL13AQ5H913 290 aaPredicted RBP19.9■□□□□ 0.78
COL13A1-201ENST00000354547 ITPRIPL1Q6GPH6 555 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 SNX32Q86XE0 403 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 GTF3C2Q8WUA4 911 aaPredicted RBP19.9■□□□□ 0.78
COL13A1-201ENST00000354547 TSNARE1Q96NA8 513 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 ADAM28Q9UKQ2 775 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 ARHGAP26Q9UNA1 814 aa19.9■□□□□ 0.78
COL13A1-201ENST00000354547 SF3B1O75533 1304 aaKnown RBP eCLIP19.9■□□□□ 0.78
COL13A1-201ENST00000354547 TIMM44O43615 452 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 LYNP07948 512 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 SCNN1GP51170 649 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 FSCBQ5H9T9 825 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 TAC4Q86UU9 113 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 ACTRT2Q8TDY3 377 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 TEKT5Q96M29 485 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 CATSPER2Q96P56 530 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 GPAMQ9HCL2 828 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 SBF1O95248 1867 aa19.89■□□□□ 0.78
COL13A1-201ENST00000354547 JUNP05412 331 aaKnown RBP19.89■□□□□ 0.77
COL13A1-201ENST00000354547 GNAT1P11488 350 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 CRYBB1P53674 252 aaPredicted RBP19.89■□□□□ 0.77
COL13A1-201ENST00000354547 POLE2P56282 527 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 GDPD5Q8WTR4 605 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 IL22Q9GZX6 179 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 GNEQ9Y223 722 aaKnown RBP19.89■□□□□ 0.77
COL13A1-201ENST00000354547 RALGAPA2Q2PPJ7 1873 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 C17orf102A2RUQ5 167 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 BUD23O43709 281 aaKnown RBP19.89■□□□□ 0.77
COL13A1-201ENST00000354547 PMPCBO75439 489 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 AHSGP02765 367 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
COL13A1-201ENST00000354547 CDH17Q12864 832 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 GRIK3Q13003 919 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 GRAMD1BQ3KR37 738 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 SCAMP5Q8TAC9 235 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 USP13Q92995 863 aaPredicted RBP19.89■□□□□ 0.77
COL13A1-201ENST00000354547 NTAN1Q96AB6 310 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 FAM96AQ9H5X1 160 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 CNGB3Q9NQW8 809 aa19.89■□□□□ 0.77
COL13A1-201ENST00000354547 DICER1Q9UPY3 1922 aaKnown RBP19.89■□□□□ 0.77
COL13A1-201ENST00000354547 TMEM233B4DJY2 109 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 CCNT2O60583 730 aaKnown RBP19.88■□□□□ 0.77
COL13A1-201ENST00000354547 RNASEH1O60930 286 aaKnown RBP19.88■□□□□ 0.77
COL13A1-201ENST00000354547 FBXO21O94952 628 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 MAGEA12P43365 314 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 AQP4P55087 323 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 PRPSAP1Q14558 356 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 LSM12Q3MHD2 195 aaKnown RBP19.88■□□□□ 0.77
COL13A1-201ENST00000354547 FOXB2Q5VYV0 432 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 ZNF280DQ6N043 979 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 CLEC14AQ86T13 490 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 HDAC11Q96DB2 347 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 SLC9A7Q96T83 725 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 PTPN18Q99952 460 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 OXSMQ9NWU1 459 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 SLC2A6Q9UGQ3 507 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 ZDHHC2Q9UIJ5 367 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 NCAM2O15394 837 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 MOCS2O96007 188 aaPredicted RBP19.88■□□□□ 0.77
COL13A1-201ENST00000354547 THP07101 528 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 ALOX15P16050 662 aaPredicted RBP19.88■□□□□ 0.77
COL13A1-201ENST00000354547 GABRB3P28472 473 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms