RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TTC39CQ8N584 583 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 TDRD5Q8NAT2 981 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 PTCD2Q8WV60 388 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 TMEM143Q96AN5 459 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 FBXL8Q96CD0 374 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 RNF157Q96PX1 679 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 TBCBQ99426 244 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 XYLT2Q9H1B5 865 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 C2orf40Q9H1Z8 148 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 TMEM216Q9P0N5 145 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CPSF3Q9UKF6 684 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 SNX9Q9Y5X1 595 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 LOC285556D6RIA3 1793 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 KCNN4O15554 427 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 KDM1AO60341 852 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 NOL3O60936 208 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 IL18RAPO95256 599 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 HMGCRP04035 888 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 APRTP07741 180 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 ALOX5P09917 674 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 HNRNPFP52597 415 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 TMBIM6P55061 237 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 NME5P56597 212 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CD300CQ08708 224 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 PPIL2Q13356 520 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CAPSQ13938 189 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 PTK2BQ14289 1009 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 BOLA3Q53S33 107 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 FAM117BQ6P1L5 589 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 GADL1Q6ZQY3 521 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 ZBTB49Q6ZSB9 765 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CYP2U1Q7Z449 544 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 IGFN1Q86VF2 1251 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 HERC6Q8IVU3 1022 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 ZNF786Q8N393 782 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 RNF148Q8N7C7 305 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 REPS2Q8NFH8 660 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 SLCO4A1Q96BD0 722 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 ZMAT2Q96NC0 199 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CIB1Q99828 191 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 EFHD1Q9BUP0 239 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CALN1Q9BXU9 219 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 MTMR12Q9C0I1 747 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 RPAP3Q9H6T3 665 aaPredicted RBP10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CYP3A43Q9HB55 503 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 ZBTB26Q9HCK0 441 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 ADAMTS5Q9UNA0 930 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 ERVK-11Q9UQG0 969 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 CPQQ9Y646 472 aa10.5□□□□□ -0.73
CHRNA1-202ENST00000348749 RLFQ13129 1914 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 PHIPQ8WWQ0 1821 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 STX16-NPEPL1H3BU86 382 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 DPYSL4O14531 572 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 PAPSS1O43252 624 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 MSCO60682 206 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 MAFO75444 373 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 CSPG5O95196 566 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 CCNA2P20248 432 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 GPD1P21695 349 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 FGFR3P22607 806 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 IREB2P48200 963 aaKnown RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 ATXN3P54252 364 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 ITGADQ13349 1161 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 CAMK2BQ13554 666 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 TNFAIP1Q13829 316 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 KCNJ8Q15842 424 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 PPP6R3Q5H9R7 873 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 INTS11Q5TA45 600 aaKnown RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 IER5Q5VY09 327 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 CDKL3Q8IVW4 592 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 MPP5Q8N3R9 675 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 AFG1LQ8WV93 481 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 SREK1Q8WXA9 508 aaKnown RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 CDKL2Q92772 493 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 FAM167AQ96KS9 214 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 PARVBQ9HBI1 364 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 KLHL3Q9UH77 587 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 KIAA1257Q9ULG3 409 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 CNOT6Q9ULM6 557 aaKnown RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 SNX13Q9Y5W8 968 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 CROCCQ5TZA2 2017 aa10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 COL11A1P12107 1806 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-202ENST00000348749 KPNA7A9QM74 516 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 APOL1O14791 398 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 HDAC3O15379 428 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 DGKIO75912 1065 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 RSL1D1O76021 490 aaKnown RBP10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 CLPXO76031 633 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 CPNE6O95741 557 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 HOXC6P09630 235 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 HSPA1AP0DMV8 641 aaKnown RBP10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 HSPA1BP0DMV9 641 aaKnown RBP10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 MLNP12872 115 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 CD19P15391 556 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 ATICP31939 592 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 MAGEA12P43365 314 aa10.48□□□□□ -0.73
CHRNA1-202ENST00000348749 CDH6P55285 790 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms