RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 DDX3XO00571 662 aaKnown RBP eCLIP12.32□□□□□ -0.445e-6■■■□□ 18.6
SEMA6A-202ENST00000343348 CD3EAPO15446 510 aaKnown RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 FBXO21O94952 628 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 CCNA2P20248 432 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 CARTPTQ16568 116 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 GPAT3Q53EU6 434 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 OFCC1Q8IZS5 231 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 TBC1D10AQ9BXI6 508 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 SAR1AQ9NR31 198 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 COMMD9Q9P000 198 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 PTGFRNQ9P2B2 879 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 A0A087X1B8 175 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 GAS2O43903 313 aaKnown RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 EGFRP00533 1210 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 OR56A5P0C7T3 313 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 CCDC166P0CW27 439 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 JAK1P23458 1154 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 MTAPQ13126 283 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 RFX4Q33E94 735 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 ARMC8Q8IUR7 673 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 DEFB106AQ8N104 65 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 ETNPPLQ8TBG4 499 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 QKIQ96PU8 341 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 MECRQ9BV79 373 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 ETNK2Q9NVF9 386 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 TISP43B9A030 160 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 TFECO14948 347 aaPredicted RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 TMCC2O75069 709 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 ZNF484Q5JVG2 852 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 MZT2AQ6P582 158 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 SPESP1Q6UW49 350 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 NETO2Q8NC67 525 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 ABCC3O15438 1527 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 ANKDD1BA6NHY2 528 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 FSBPO95073 299 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 EIF2B5Q13144 721 aaKnown RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 BIKQ13323 160 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 INO80DQ53TQ3 878 aaPredicted RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 HLA-DQA1Q5Y7H0 255 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 MARK2Q7KZI7 788 aaKnown RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 SYT15Q9BQS2 421 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 MMADHCQ9H3L0 296 aaPredicted RBP12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 TNS3Q68CZ2 1445 aa12.32□□□□□ -0.44
SEMA6A-202ENST00000343348 TBKBP1A7MCY6 615 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 TSPAN9O75954 239 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 PTPN5P54829 565 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 SPIRE1Q08AE8 756 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 SCRN3Q0VDG4 424 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 FIGNQ5HY92 759 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 FBXW8Q8N3Y1 598 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 CLN6Q9NWW5 311 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 STARD13Q9Y3M8 1113 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 LACTBL1A8MY62 500 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 AREL1O15033 823 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 LRATO95237 230 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 IFNGR2P38484 337 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 RAPSNQ13702 412 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 PPP1R26Q5T8A7 1209 aaPredicted RBP12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 NET1Q7Z628 596 aaPredicted RBP12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 HPS6Q86YV9 775 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 SMYD1Q8NB12 490 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 SLC2A14Q8TDB8 520 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 MCOLN3Q8TDD5 553 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 CDH9Q9ULB4 789 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 CASZ1Q86V15 1759 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 COX4I1P13073 169 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 HNF4AP41235 474 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 PSMD4P55036 377 aaKnown RBP12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 FOLH1Q04609 750 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 QPRTQ15274 297 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 Q4G0T1 1027 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 TPGS1Q6ZTW0 290 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 ZCCHC9Q8N567 271 aaKnown RBP12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 SELENOMQ8WWX9 145 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 PIGKQ92643 395 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 PCDHA11Q9Y5I1 949 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 CLTCL1P53675 1640 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 E5RJQ4 531 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 URODP06132 367 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 ALADP13716 330 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 BDNFP23560 247 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 GRIA4P48058 902 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 CRY1Q16526 586 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 PRMT6Q96LA8 375 aaPredicted RBP12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 SLC25A23Q9BV35 468 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 ACSS2Q9NR19 701 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 C2orf71A6NGG8 1288 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 NCAM2O15394 837 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 ZBTB14O43829 449 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 LINC00032P0C843 101 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 NAGLUP54802 743 aa12.31□□□□□ -0.44
SEMA6A-202ENST00000343348 NFIAQ12857 509 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms