RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ARHGAP36Q6ZRI8 547 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 SDCCAG8Q86SQ7 713 aaPredicted RBP24.45■■□□□ 1.5
NELFB-201ENST00000343053 CCNYL1Q8N7R7 359 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 ILKAPQ9H0C8 392 aaPredicted RBP24.45■■□□□ 1.5
NELFB-201ENST00000343053 WDR6Q9NNW5 1121 aaKnown RBP24.45■■□□□ 1.5
NELFB-201ENST00000343053 CASS4Q9NQ75 786 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 MYL4P12829 197 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 INHBEP58166 350 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 CCNA1P78396 465 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 MPP1Q00013 466 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 POU6F1Q14863 301 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 DPP9Q86TI2 863 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 ST13P4Q8IZP2 240 aaPredicted RBP24.45■■□□□ 1.5
NELFB-201ENST00000343053 JADE3Q92613 823 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 NT5C3BQ969T7 300 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 FAM96AQ9H5X1 160 aa24.45■■□□□ 1.5
NELFB-201ENST00000343053 DYNC1LI2O43237 492 aaPredicted RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 SNUPNO95149 360 aaKnown RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 MT-CYBP00156 380 aaPredicted RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 CD4P01730 458 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 SBK3P0C264 359 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 SMIM10L2AP0DMW4 78 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 SMIM10L2BP0DMW5 78 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 AFF1P51825 1210 aaKnown RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 PDK3Q15120 406 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 ADGRG6Q86SQ4 1221 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 SATL1Q86VE3 508 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 HNRNPABQ99729 332 aaKnown RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 FTHL17Q9BXU8 183 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 ADARB2Q9NS39 739 aaKnown RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 OXSMQ9NWU1 459 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 RUVBL2Q9Y230 463 aaKnown RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 SRGAP2BP0DMP2 458 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 HNRNPDQ14103 355 aaKnown RBP24.44■■□□□ 1.5
NELFB-201ENST00000343053 DGKDQ16760 1214 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 SV2CQ496J9 727 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 SEL1L3Q68CR1 1132 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 ZNF280DQ6N043 979 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 KBTBD6Q86V97 674 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 DSELQ8IZU8 1212 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 GPRC5AQ8NFJ5 357 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 GBA3Q9H227 469 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 GDAP2Q9NXN4 497 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 TLK1Q9UKI8 766 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 ADAM28Q9UKQ2 775 aa24.44■■□□□ 1.5
NELFB-201ENST00000343053 GLDCP23378 1020 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 ALDH1A3P47895 512 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 RAB27AP51159 221 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 FOLH1Q04609 750 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 R3HDM1Q15032 1099 aaKnown RBP24.43■■□□□ 1.5
NELFB-201ENST00000343053 MFN1Q8IWA4 741 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 SNX31Q8N9S9 440 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 RTKNQ9BST9 563 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 SPATA16Q9BXB7 569 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 CRTAC1Q9NQ79 661 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 DTNAQ9Y4J8 743 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 NRCAMQ92823 1304 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 PLXNB2O15031 1838 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 GK3PQ14409 553 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 KCTD11Q693B1 232 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 RPS27LQ71UM5 84 aaKnown RBP24.43■■□□□ 1.5
NELFB-201ENST00000343053 FASTKD5Q7L8L6 764 aaKnown RBP24.43■■□□□ 1.5
NELFB-201ENST00000343053 ICA1LQ8NDH6 482 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 ATXN3LQ9H3M9 355 aa24.43■■□□□ 1.5
NELFB-201ENST00000343053 SUDS3Q9H7L9 328 aaPredicted RBP24.43■■□□□ 1.5
NELFB-201ENST00000343053 PDCD11Q14690 1871 aaKnown RBP24.43■■□□□ 1.5
NELFB-201ENST00000343053 MPOP05164 745 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 FAM200BP0CF97 657 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 DPP6P42658 865 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 PPIDQ08752 370 aaKnown RBP24.42■■□□□ 1.5
NELFB-201ENST00000343053 RWDD4Q6NW29 188 aaKnown RBP24.42■■□□□ 1.5
NELFB-201ENST00000343053 TMC7Q7Z402 723 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 PTAR1Q7Z6K3 402 aaPredicted RBP24.42■■□□□ 1.5
NELFB-201ENST00000343053 ISL2Q96A47 359 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 TMA16Q96EY4 203 aaKnown RBP24.42■■□□□ 1.5
NELFB-201ENST00000343053 SIK2Q9H0K1 926 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 COPS7BQ9H9Q2 264 aaPredicted RBP24.42■■□□□ 1.5
NELFB-201ENST00000343053 XPR1Q9UBH6 696 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 IPPQ9Y573 584 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 MYBPHLA2RUH7 354 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 DFFAO00273 331 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 MATN2O00339 956 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 KIF3CO14782 793 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 GABRB3P28472 473 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 FLOT2Q14254 428 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 TLR1Q15399 786 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 SLC2A13Q96QE2 648 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 TKTL2Q9H0I9 626 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 ZNF408Q9H9D4 720 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 TSC2P49815 1807 aa24.42■■□□□ 1.5
NELFB-201ENST00000343053 TIMM44O43615 452 aa24.41■■□□□ 1.5
NELFB-201ENST00000343053 YBX3P16989 372 aaKnown RBP eCLIP24.41■■□□□ 1.52e-6■■■■□ 20.2
NELFB-201ENST00000343053 SNX17Q15036 470 aa24.41■■□□□ 1.5
NELFB-201ENST00000343053 RBBP5Q15291 538 aaKnown RBP24.41■■□□□ 1.5
NELFB-201ENST00000343053 FSTL5Q8N475 847 aaPredicted RBP24.41■■□□□ 1.5
NELFB-201ENST00000343053 IPMKQ8NFU5 416 aa24.41■■□□□ 1.5
NELFB-201ENST00000343053 SREK1Q8WXA9 508 aaKnown RBP24.41■■□□□ 1.5
NELFB-201ENST00000343053 DCUN1D1Q96GG9 259 aa24.41■■□□□ 1.5
NELFB-201ENST00000343053 NPAS2Q99743 824 aa24.41■■□□□ 1.5
NELFB-201ENST00000343053 C15orf38-AP3S2A0A0A6YYH1 394 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms