RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SIGLEC10Q96LC7 697 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 SH2D3AQ9BRG2 576 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 SDCBP2Q9H190 292 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 RABL2BQ9UNT1 228 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 GREB1LQ9C091 1923 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-201ENST00000342245 ACOX3O15254 700 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 DNAJB5O75953 348 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 SEC24DO94855 1032 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-201ENST00000342245 CAPGP40121 348 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 GRIA3P42263 894 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 INAVAQ3KP66 663 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 PPP6R3Q5H9R7 873 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-201ENST00000342245 C6orf10Q5SRN2 563 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 BROXQ5VW32 411 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 KIAA0408Q6ZU52 694 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 SFRP1Q8N474 314 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 CBR4Q8N4T8 237 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 CMASQ8NFW8 434 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-201ENST00000342245 CHAC2Q8WUX2 184 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 BCL7BQ9BQE9 202 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 TRIM15Q9C019 465 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 OR2B2Q9GZK3 357 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 SCUBE2Q9NQ36 999 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 PCDHGA7Q9Y5G6 932 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 TCAF2A6NFQ2 919 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 DLGAP1O14490 977 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 TRIM13O60858 407 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 UBL4AP11441 157 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 RFC1P35251 1148 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-201ENST00000342245 RPL14P50914 215 aaKnown RBP18.81■□□□□ 0.6
SMPD1-201ENST00000342245 RAD23AP54725 363 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 MLLT10P55197 1068 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 STX1BP61266 288 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 SAMD4BQ5PRF9 694 aaKnown RBP18.81■□□□□ 0.6
SMPD1-201ENST00000342245 STEAP4Q687X5 459 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 UGT3A1Q6NUS8 523 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 B3GNT9Q6UX72 402 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 ARMC8Q8IUR7 673 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 LACC1Q8IV20 430 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 TMEM216Q9P0N5 145 aa18.81■□□□□ 0.6
SMPD1-201ENST00000342245 H7C0C1 242 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 VWA5AO00534 786 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 SLC16A4O15374 487 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 TPSB2P20231 275 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 ATP5OP48047 213 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 CLDN10P78369 228 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 PDK2Q15119 407 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 TPSAB1Q15661 275 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 SLC27A3Q5K4L6 730 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 FAM182BQ5T319 152 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 TAS2R42Q7RTR8 314 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 DHRSXQ8N5I4 330 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 ANGPTL6Q8NI99 470 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 C17orf80Q9BSJ5 609 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 ZNF577Q9BSK1 485 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 TRPC5Q9UL62 973 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-201ENST00000342245 RAD54BQ9Y620 910 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 GAKO14976 1311 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 RGPD3A6NKT7 1758 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-201ENST00000342245 RGPD4Q7Z3J3 1758 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 ISPDA4D126 451 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 HLA-DRAP01903 254 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 CXCR2P25025 360 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 BMPR1AP36894 532 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 GRM5P41594 1212 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 ZNF280DQ6N043 979 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 OR2T34Q8NGX1 318 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 OR2T3Q8NH03 318 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 ZNF606Q8WXB4 792 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 ZUFSPQ96AP4 578 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 CCDC17Q96LX7 622 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 SPAG4Q9NPE6 437 aa18.8■□□□□ 0.6
SMPD1-201ENST00000342245 KAT6AQ92794 2004 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SAC3D1A6NKF1 404 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 LRCH4O75427 683 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 RASAL1O95294 804 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 APRTP07741 180 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 NR4A1P22736 598 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 NIPAL4Q0D2K0 466 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 BFSP2Q13515 415 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 ATP6AP1Q15904 470 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 PGS1Q32NB8 556 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 ZACNQ401N2 412 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 TMTC4Q5T4D3 741 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SMYD5Q6GMV2 418 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 RFPL4BQ6ZWI9 263 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 DHFR2Q86XF0 187 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 LSMEM2Q8N112 164 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 FAM156AQ8NDB6 213 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SNX19Q92543 992 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SLC45A3Q96JT2 553 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 RIT2Q99578 217 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 RNF38Q9H0F5 515 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 FANCEQ9HB96 536 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SLC38A10Q9HBR0 1119 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 CCM2LQ9NUG4 571 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-201ENST00000342245 RBAKQ9NYW8 714 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-201ENST00000342245 TBC1D14Q9P2M4 693 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 ADAM28Q9UKQ2 775 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms