RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ALDH1A1P00352 501 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 CYP2B6P20813 491 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 ADORA2AP29274 412 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 NOS2P35228 1153 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 TAF6P49848 677 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 NUP107P57740 925 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 USP46P62068 366 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 ERO1BQ86YB8 467 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 MARVELD2Q8N4S9 558 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 CCDC185Q8N715 623 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 NETO2Q8NC67 525 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 TSPAN17Q96FV3 270 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 VAT1Q99536 393 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 OSBPL11Q9BXB4 747 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 UBE2OQ9C0C9 1292 aaKnown RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 PDZD7Q9H5P4 517 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 PFDN4Q9NQP4 134 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 NR2E3Q9Y5X4 410 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 MANSC4A6NHS7 340 aaPredicted RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 GOLGA8TH3BQL2 631 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 VAPBO95292 243 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 XRCC1P18887 633 aaPredicted RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 ATXN1P54253 815 aaKnown RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 PLOD1Q02809 727 aaPredicted RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 ITKQ08881 620 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 SV2CQ496J9 727 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 NADK2Q4G0N4 442 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 C6orf52Q5T4I8 152 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 NCBP2-AS2Q69YL0 99 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 PGM2L1Q6PCE3 622 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 TTC33Q6PID6 262 aaPredicted RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 PIWIL4Q7Z3Z4 852 aaKnown RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 TTC30AQ86WT1 665 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 TMEM126BQ8IUX1 230 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 ZNF567Q8N184 647 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 PCDH20Q8N6Y1 951 aaKnown RBP9.59□□□□□ -0.87
TRERF1-201ENST00000340840 IPMKQ8NFU5 416 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 IFT43Q96FT9 208 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 MARK4Q96L34 752 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 DDIT4Q9NX09 232 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 CPA4Q9UI42 421 aa9.59□□□□□ -0.87
TRERF1-201ENST00000340840 ANXA9O76027 345 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 ALDH1A2O94788 518 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 HSPA1AP0DMV8 641 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 HSPA1BP0DMV9 641 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 NIPAL4Q0D2K0 466 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 FASTKQ14296 549 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 SLC25A52Q3SY17 297 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 SAMD4BQ5PRF9 694 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 OGFRL1Q5TC84 451 aaPredicted RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 FOXB2Q5VYV0 432 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 KBTBD6Q86V97 674 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 TEPSINQ96N21 525 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 RHOJQ9H4E5 214 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 TBC1D23Q9NUY8 699 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 SNTG2Q9NY99 539 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 UBP1Q9NZI7 540 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 IGSF9Q9P2J2 1179 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 AAR2Q9Y312 384 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 ANGPT2O15123 496 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 TRMUO75648 421 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 OR6B1O95007 311 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 ASLP04424 464 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 IL4RP24394 825 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 DPYSQ14117 519 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 AGAP9Q5VTM2 703 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 ZYG11AQ6WRX3 759 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 PYROXD2Q8N2H3 581 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 ZNF786Q8N393 782 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 LRRC52Q8N7C0 313 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 KCTD4Q8WVF5 259 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 WNT8BQ93098 351 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 NRBF2Q96F24 287 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 CNDP1Q96KN2 507 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 SEMA6AQ9H2E6 1030 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 MRPL46Q9H2W6 279 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 TRPC7Q9HCX4 862 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 RSL24D1Q9UHA3 163 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 CROTQ9UKG9 612 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 DFFAO00273 331 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 MRASO14807 208 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 AP2A1O95782 977 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 EEF1B2P24534 225 aaKnown RBP9.58□□□□□ -0.88
TRERF1-201ENST00000340840 CA8P35219 290 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 HERC3Q15034 1050 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 DLG2Q15700 870 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 NOTUMQ6P988 496 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 LBX2Q6XYB7 198 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 PPP1R2P1Q96PQ5 205 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 SLC25A23Q9BV35 468 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 MINDY3Q9H8M7 445 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 CHST12Q9NRB3 414 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 XPR1Q9UBH6 696 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 ZNF711Q9Y462 761 aa9.58□□□□□ -0.88
TRERF1-201ENST00000340840 PSMD12O00232 456 aaPredicted RBP9.57□□□□□ -0.88
TRERF1-201ENST00000340840 SEC24DO94855 1032 aaPredicted RBP9.57□□□□□ -0.88
TRERF1-201ENST00000340840 PENKP01210 267 aaPredicted RBP9.57□□□□□ -0.88
TRERF1-201ENST00000340840 ERCC2P18074 760 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms