RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PLD1Q13393 1074 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ANKRD20A4Q4UJ75 823 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 FAM133BQ5BKY9 247 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 PACS1Q6VY07 963 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TMEM135Q86UB9 458 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CHSY1Q86X52 802 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 LGI2Q8N0V4 545 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 NDUFAF2Q8N183 169 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CCDC197Q8NCU1 140 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ARMC2Q8NEN0 867 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 MOCOSQ96EN8 888 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 MRGPRX2Q96LB1 330 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 NSMCE3Q96MG7 304 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 FICDQ9BVA6 458 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 UBE2OQ9C0C9 1292 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ZYG11BQ9C0D3 744 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CAB39LQ9H9S4 337 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 RC3H2Q9HBD1 1191 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 GLOD4Q9HC38 313 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SENP1Q9P0U3 644 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TRHDEQ9UKU6 1024 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 PHTF1Q9UMS5 762 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SMG5Q9UPR3 1016 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 RAD54BQ9Y620 910 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 IGLV3-10A0A075B6K4 115 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 C2orf71A6NGG8 1288 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 FGF10O15520 208 aaPredicted RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CACNG3O60359 315 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TSPAN3O60637 253 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 KRT37O76014 449 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ABLIM3O94929 683 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 OAS1P00973 400 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SOD2P04179 222 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 PRKCGP05129 697 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 POLBP06746 335 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 BMP1P13497 986 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 BGNP21810 368 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CORO7P57737 925 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 DSC2Q02487 901 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 PDK4Q16654 411 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ESRP1Q6NXG1 681 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TMEM150AQ86TG1 271 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 RNF135Q8IUD6 432 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC39A11Q8N1S5 342 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ANKLE1Q8NAG6 615 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CCT6BQ92526 530 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CERS2Q96G23 380 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TMEM169Q96HH4 297 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 C20orf27Q9GZN8 174 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 NACA2Q9H009 215 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 BFARQ9NZS9 450 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CXXC1Q9P0U4 656 aaPredicted RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SAMD15Q9P1V8 674 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 PLXNA3P51805 1871 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CCDC195A0A1B0GUA6 201 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TPP1O14773 563 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 GBP2P32456 591 aaPredicted RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ATP5C1P36542 298 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CD86P42081 329 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 GJA8P48165 433 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 RPL10AP62906 217 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TWF1Q12792 350 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ZCCHC23Q6ZST2 131 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 OTOAQ7RTW8 1153 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 RASSF3Q86WH2 238 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 UMODL1-AS1Q8N2C9 162 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ARHGAP18Q8N392 663 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 OTUD6BQ8N6M0 293 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 OR7D4Q8NG98 312 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 APOPT1Q96IL0 206 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SMIM14Q96QK8 99 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TTLL2Q9BWV7 592 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SEZ6LQ9BYH1 1024 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 PPCSQ9HAB8 311 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ACSS2Q9NR19 701 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 TMEM248Q9NWD8 314 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF180Q9UJW8 692 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ZFP37Q9Y6Q3 630 aaPredicted RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 A0A0U1RQS6 177 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 COPEO14579 308 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TEX28O15482 410 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 BUD23O43709 281 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 DNAJC6O75061 913 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ZWINTO95229 277 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 GSRP00390 522 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TIMP1P01033 207 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 MMP2P08253 660 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ITGA2BP08514 1039 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 SLC2A3P11169 496 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 RAG1P15918 1043 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 RHOQP17081 205 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 GJA1P17302 382 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TACR2P21452 398 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ARNTP27540 789 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 GABRB3P28472 473 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ADRA1AP35348 466 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF135P52742 658 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 SLC18A1P54219 525 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms