RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CLLU1OSQ5K130 101 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 TEDDM1Q5T9Z0 273 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 SNX30Q5VWJ9 437 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 METTL21CQ5VZV1 264 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 SCYL2Q6P3W7 929 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 RINLQ6ZS11 566 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 CCDC117Q8IWD4 279 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 SCUBE1Q8IWY4 988 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 ADGRF2Q8IZF7 708 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 LRRC43Q8N309 656 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 SMRP1Q8NCR6 262 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 VN1R2Q8NFZ6 395 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 TTC8Q8TAM2 541 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 RDH11Q8TC12 318 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 KBTBD7Q8WVZ9 684 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 PGAP3Q96FM1 320 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 CPB2Q96IY4 423 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 NPY6RQ99463 290 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 OSBPL1AQ9BXW6 950 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 DHX35Q9H5Z1 703 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 MRM3Q9HC36 420 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 MRGBPQ9NV56 204 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 PCMTD2Q9NV79 361 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 ZDHHC7Q9NXF8 308 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 NSMCE4AQ9NXX6 385 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 APOBEC2Q9Y235 224 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 LZTS1Q9Y250 596 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 ARIH1Q9Y4X5 557 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 SNX9Q9Y5X1 595 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 PLXNA4Q9HCM2 1894 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 ZNF638Q14966 1978 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 MAGEB16A2A368 324 aa11□□□□□ -0.65
RTN3-201ENST00000338850 PRR33A8MZF0 331 aa11□□□□□ -0.65
RTN3-201ENST00000338850 HGSO14964 777 aaPredicted RBP11□□□□□ -0.65
RTN3-201ENST00000338850 PER2O15055 1255 aa11□□□□□ -0.65
RTN3-201ENST00000338850 PSMD3O43242 534 aa11□□□□□ -0.65
RTN3-201ENST00000338850 AVILO75366 819 aa11□□□□□ -0.65
RTN3-201ENST00000338850 USP1O94782 785 aa11□□□□□ -0.65
RTN3-201ENST00000338850 PROCP04070 461 aa11□□□□□ -0.65
RTN3-201ENST00000338850 MPOP05164 745 aa11□□□□□ -0.65
RTN3-201ENST00000338850 VAV1P15498 845 aa11□□□□□ -0.65
RTN3-201ENST00000338850 MX2P20592 715 aa11□□□□□ -0.65
RTN3-201ENST00000338850 LRPAP1P30533 357 aa11□□□□□ -0.65
RTN3-201ENST00000338850 HOXA11P31270 313 aaPredicted RBP11□□□□□ -0.65
RTN3-201ENST00000338850 PBX3P40426 434 aa11□□□□□ -0.65
RTN3-201ENST00000338850 POLD2P49005 469 aa11□□□□□ -0.65
RTN3-201ENST00000338850 RGS7P49802 495 aa11□□□□□ -0.65
RTN3-201ENST00000338850 TAF6P49848 677 aa11□□□□□ -0.65
RTN3-201ENST00000338850 SERPINB8P50452 374 aa11□□□□□ -0.65
RTN3-201ENST00000338850 CSRP3P50461 194 aa11□□□□□ -0.65
RTN3-201ENST00000338850 AP2B1P63010 937 aa11□□□□□ -0.65
RTN3-201ENST00000338850 IRX4P78413 519 aa11□□□□□ -0.65
RTN3-201ENST00000338850 DEUP1Q05D60 604 aa11□□□□□ -0.65
RTN3-201ENST00000338850 GRIK3Q13003 919 aa11□□□□□ -0.65
RTN3-201ENST00000338850 SEMA3BQ13214 749 aa11□□□□□ -0.65
RTN3-201ENST00000338850 DPYSQ14117 519 aa11□□□□□ -0.65
RTN3-201ENST00000338850 DUSP6Q16828 381 aa11□□□□□ -0.65
RTN3-201ENST00000338850 SOWAHAQ2M3V2 549 aa11□□□□□ -0.65
RTN3-201ENST00000338850 PDE12Q6L8Q7 609 aaKnown RBP11□□□□□ -0.65
RTN3-201ENST00000338850 RFWD3Q6PCD5 774 aa11□□□□□ -0.65
RTN3-201ENST00000338850 TRMT10BQ6PF06 316 aaKnown RBP11□□□□□ -0.65
RTN3-201ENST00000338850 ACOT1Q86TX2 421 aa11□□□□□ -0.65
RTN3-201ENST00000338850 TREML1Q86YW5 311 aa11□□□□□ -0.65
RTN3-201ENST00000338850 ABI1Q8IZP0 508 aa11□□□□□ -0.65
RTN3-201ENST00000338850 SCML4Q8N228 414 aa11□□□□□ -0.65
RTN3-201ENST00000338850 CCDC33Q8N5R6 958 aa11□□□□□ -0.65
RTN3-201ENST00000338850 PDCD7Q8N8D1 485 aaKnown RBP11□□□□□ -0.65
RTN3-201ENST00000338850 RNF169Q8NCN4 708 aa11□□□□□ -0.65
RTN3-201ENST00000338850 SREK1Q8WXA9 508 aaKnown RBP11□□□□□ -0.65
RTN3-201ENST00000338850 FAM122AQ96E09 287 aa11□□□□□ -0.65
RTN3-201ENST00000338850 ZNF558Q96NG5 402 aa11□□□□□ -0.65
RTN3-201ENST00000338850 PPP1R2P1Q96PQ5 205 aa11□□□□□ -0.65
RTN3-201ENST00000338850 TRAPPC9Q96Q05 1148 aa11□□□□□ -0.65
RTN3-201ENST00000338850 CDCA3Q99618 268 aaPredicted RBP11□□□□□ -0.65
RTN3-201ENST00000338850 ZNF184Q99676 751 aaPredicted RBP11□□□□□ -0.65
RTN3-201ENST00000338850 VCX3BQ9H321 246 aa11□□□□□ -0.65
RTN3-201ENST00000338850 CHST12Q9NRB3 414 aa11□□□□□ -0.65
RTN3-201ENST00000338850 GPATCH2LQ9NWQ4 482 aa11□□□□□ -0.65
RTN3-201ENST00000338850 PPARGC1AQ9UBK2 798 aaKnown RBP11□□□□□ -0.65
RTN3-201ENST00000338850 EMCNQ9ULC0 261 aa11□□□□□ -0.65
RTN3-201ENST00000338850 HCN4Q9Y3Q4 1203 aa11□□□□□ -0.65
RTN3-201ENST00000338850 B2RBV5 119 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 CAPN9O14815 690 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 DCLK1O15075 740 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 MAP3K7O43318 606 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 EOMESO95936 686 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 ALDOAP04075 364 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 POLBP06746 335 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 ITGA2BP08514 1039 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 CRABP2P29373 138 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 HTR7P34969 479 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 PPM1AP35813 382 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 CPOXP36551 454 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 LIMK2P53671 638 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 NRLP54845 237 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 AQP5P55064 265 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 ILF2Q12905 390 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms