RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 RAD9AQ99638 391 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 TBL1YQ9BQ87 522 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 NSRP1Q9H0G5 558 aaKnown RBP16.55■□□□□ 0.24
HPS1-202ENST00000338546 SP110Q9HB58 689 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 SOX13Q9UN79 622 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 RPS6KL1Q9Y6S9 549 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 FAM169AQ9Y6X4 670 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 CXorf49A8MYA2 514 aaPredicted RBP16.55■□□□□ 0.24
HPS1-202ENST00000338546 STC2O76061 302 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 OLFM2O95897 454 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 F11P03951 625 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 HLA-DQB2P05538 268 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 DRD4P21917 467 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 ADRA1AP35348 466 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 ADGRF1Q5T601 910 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 TMCO4Q5TGY1 634 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 TRMT10BQ6PF06 316 aaKnown RBP16.55■□□□□ 0.24
HPS1-202ENST00000338546 LILRA6Q6PI73 481 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 POTEHQ6S545 545 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 RGS9BPQ6ZS82 235 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 SH2D5Q6ZV89 423 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 CPLX4Q7Z7G2 160 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 ANKRD42Q8N9B4 389 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 USP33Q8TEY7 942 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 ZBED2Q9BTP6 218 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 KIFC1Q9BW19 673 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 ARNT2Q9HBZ2 717 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 MRM3Q9HC36 420 aaKnown RBP16.55■□□□□ 0.24
HPS1-202ENST00000338546 SMYD2Q9NRG4 433 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 MKS1Q9NXB0 559 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
HPS1-202ENST00000338546 FOXO6A8MYZ6 492 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 PRAMEF11O60813 436 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 ADH1AP07327 375 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 CA4P22748 312 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 PCID2Q5JVF3 399 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 SETD3Q86TU7 594 aaPredicted RBP16.54■□□□□ 0.24
HPS1-202ENST00000338546 C4orf33Q8N1A6 199 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
HPS1-202ENST00000338546 HERVK_113Q902F9 699 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 IMP4Q96G21 291 aaKnown RBP16.54■□□□□ 0.24
HPS1-202ENST00000338546 CERS2Q96G23 380 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 EMILIN2Q9BXX0 1053 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 CHD5Q8TDI0 1954 aa16.54■□□□□ 0.24
HPS1-202ENST00000338546 GOLGA6L7A0A1B0GV03 622 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 CNPP09543 421 aaKnown RBP16.53■□□□□ 0.24
HPS1-202ENST00000338546 CORO1AP31146 461 aaKnown RBP16.53■□□□□ 0.24
HPS1-202ENST00000338546 SLC6A4P31645 630 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 ETFBP38117 255 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 CCT5P48643 541 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 WDR4P57081 412 aaKnown RBP16.53■□□□□ 0.24
HPS1-202ENST00000338546 SLC14A2Q15849 920 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 ANKRD20A4Q4UJ75 823 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 TMEM240Q5SV17 173 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 GKAP1Q5VSY0 366 aaPredicted RBP16.53■□□□□ 0.24
HPS1-202ENST00000338546 RANBP10Q6VN20 620 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 ZNF783Q6ZMS7 281 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 MICALCLQ6ZW33 695 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 TMEM150AQ86TG1 271 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 DENND1CQ8IV53 801 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 KLHL23Q8NBE8 558 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 MGARPQ8TDB4 240 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 ACMSDQ8TDX5 336 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 AUTS2Q8WXX7 1259 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 APOPT1Q96IL0 206 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 RNF38Q9H0F5 515 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 KIF9Q9HAQ2 790 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 IL21Q9HBE4 155 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 NSMCE4AQ9NXX6 385 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 ANAPC1Q9H1A4 1944 aa16.53■□□□□ 0.24
HPS1-202ENST00000338546 ILVBLA1L0T0 632 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 TRIM49D1C9J1S8 452 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 H3BNC9 293 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 TGM5O43548 720 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 USP12O75317 370 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 SPAG7O75391 227 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 CXCL14O95715 111 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 KLKB1P03952 638 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 RPA3P35244 121 aaPredicted RBP16.52■□□□□ 0.24
HPS1-202ENST00000338546 CCNFP41002 786 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 HNRNPH2P55795 449 aaKnown RBP16.52■□□□□ 0.24
HPS1-202ENST00000338546 CRADDP78560 199 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 GNA12Q03113 381 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 RFTN1Q14699 578 aaPredicted RBP16.52■□□□□ 0.24
HPS1-202ENST00000338546 LRRC14Q15048 493 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 SEPT7Q16181 437 aaKnown RBP16.52■□□□□ 0.24
HPS1-202ENST00000338546 GRTP1Q5TC63 336 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 BBS5Q8N3I7 341 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 BADQ92934 168 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 TADA1Q96BN2 335 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 ZNF419Q96HQ0 510 aaPredicted RBP16.52■□□□□ 0.24
HPS1-202ENST00000338546 KLHL5Q96PQ7 755 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 CPNE1Q99829 537 aa16.52■□□□□ 0.24
HPS1-202ENST00000338546 AGO1Q9UL18 857 aaKnown RBP16.52■□□□□ 0.24
HPS1-202ENST00000338546 ZFP37Q9Y6Q3 630 aaPredicted RBP16.52■□□□□ 0.24
HPS1-202ENST00000338546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
HPS1-202ENST00000338546 ZCWPW2A0A1B0GU75 182 aa16.51■□□□□ 0.23
HPS1-202ENST00000338546 A0A1B0GVM2 712 aa16.51■□□□□ 0.23
HPS1-202ENST00000338546 TCAF2A6NFQ2 919 aa16.51■□□□□ 0.23
HPS1-202ENST00000338546 J3KR12 359 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms