RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ZNF821O75541 412 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 ZMPSTE24O75844 475 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 OR1E1P30953 314 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 CHRNA3P32297 505 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 SOX5P35711 763 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 ACVRL1P37023 503 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 OXCT1P55809 520 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 CDR2Q01850 454 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 SFSWAPQ12872 951 aaKnown RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 PTP4A2Q12974 167 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 CT47A1Q5JQC4 288 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 AGBL4Q5VU57 503 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 LRSAM1Q6UWE0 723 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 LRRC31Q6UY01 552 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 RBM43Q6ZSC3 357 aaKnown RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 DRC7Q8IY82 874 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 ZCCHC14Q8WYQ9 949 aaKnown RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 PCMTD1Q96MG8 357 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 PPP1R9BQ96SB3 815 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 ELF4Q99607 663 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 APOBEC2Q9Y235 224 aaKnown RBP13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 DMXL2Q8TDJ6 3036 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 IGLV3-10A0A075B6K4 115 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 KPNA3O00505 521 aaPredicted RBP13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 SLC31A1O15431 190 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 FLRT2O43155 660 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 PLRG1O43660 514 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 RNGTTO60942 597 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 LSM8O95777 96 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 CD160O95971 181 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 PRLRP16471 622 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 MMP8P22894 467 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 GKP32189 559 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 ADRA1BP35368 520 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 SCNN1AP37088 669 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 ANP32AP39687 249 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 CCT8P50990 548 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 DNA2P51530 1060 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 KRT83P78385 493 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 DNAJC3Q13217 504 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 NCAPHQ15003 741 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 PIP5KL1Q5T9C9 394 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 PRPF39Q86UA1 669 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 DNAAF5Q86Y56 855 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 EID2Q8N6I1 236 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM131CQ96AQ9 280 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 HAPLN3Q96S86 360 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 HSD3B7Q9H2F3 369 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 LIMA1Q9UHB6 759 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 HS3ST2Q9Y278 367 aa13.68□□□□□ -0.22
NUDCD3-201ENST00000338427 PTPRBP23467 1997 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 GOLGA4Q13439 2230 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 C2CD4BA6NLJ0 364 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 LATO43561 262 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 UNGP13051 313 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 RFC1P35251 1148 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 STAT1P42224 750 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 NXPH1P58417 271 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 UBXN1Q04323 297 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM46CQ5VWP2 391 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 SMYD5Q6GMV2 418 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 WDR59Q6PJI9 974 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 SASS6Q6UVJ0 657 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 DHRS13Q6UX07 377 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 DPY19L3Q6ZPD9 716 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 APTXQ7Z2E3 356 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 SETD3Q86TU7 594 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 PYROXD2Q8N2H3 581 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 CCDC185Q8N715 623 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 MDM1Q8TC05 714 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 SAP25Q8TEE9 199 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 CDC6Q99741 560 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 FZD3Q9NPG1 666 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 DNAI1Q9UI46 699 aa13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 ZFR2Q9UPR6 939 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 FCF1Q9Y324 198 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-201ENST00000338427 A0A1W2PQU0 124 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ILVBLA1L0T0 632 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 C1QTNF3-AMACRE9PGA6 284 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 TEX33O43247 280 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 TNFSF14O43557 240 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 SDC3O75056 442 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 LEFTY1O75610 366 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 DKK1O94907 266 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ITGAVP06756 1048 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ATP1A3P13637 1013 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 CDK11BP21127 795 aaKnown RBP13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 GRK6P43250 576 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 CLDN2P57739 230 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 ARF5P84085 180 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 GNA12Q03113 381 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 FKBP15Q5T1M5 1219 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 SEL1L3Q68CR1 1132 aa13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 RWDD4Q6NW29 188 aaKnown RBP13.66□□□□□ -0.22
NUDCD3-201ENST00000338427 TMPRSS7Q7RTY8 843 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms