RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PCID2Q5JVF3 399 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 UNC93AQ86WB7 457 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 AENQ8WTP8 325 aaKnown RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 HGH1Q9BTY7 390 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 ZNF112Q9UJU3 913 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 R3HDM2Q9Y2K5 976 aaKnown RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 XYLBO75191 536 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 MICAL2O94851 1124 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ERBB2P04626 1255 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ABHD2P08910 425 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ARF4P18085 180 aaPredicted RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 TOB1P50616 345 aaPredicted RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 TMEM119Q4V9L6 283 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 USP45Q70EL2 814 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ZNF276Q8N554 614 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 PPP1R16AQ96I34 528 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 POMKQ9H5K3 350 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 POPDC2Q9HBU9 364 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 MLYCDO95822 493 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 CXCL8P10145 99 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ACADLP28330 430 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 TLX1P31314 330 aaPredicted RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 CBFBQ13951 182 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 NR1D2Q14995 579 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 SEC23AQ15436 765 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 KBTBD8Q8NFY9 601 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 RDH11Q8TC12 318 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 TPD52L3Q96J77 140 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 CDRT15Q96T59 188 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 FAIM2Q9BWQ8 316 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 KCNQ5Q9NR82 932 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ADARB2Q9NS39 739 aaKnown RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 CMTM6Q9NX76 183 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 SALL1Q9NSC2 1324 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 CHP2O43745 196 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 MAP3K6O95382 1288 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 PARNO95453 639 aaKnown RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 VTNP04004 478 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 GJA8P48165 433 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 COPZ1P61923 177 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 BNIP2Q12982 314 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 PCBP1Q15365 356 aaKnown RBP eCLIP13.26□□□□□ -0.29
HLCS-201ENST00000336648 ALG11Q2TAA5 492 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 FAM83AQ86UY5 434 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 OR52L1Q8NGH7 329 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 CPB2Q96IY4 423 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 H3BRB1 525 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 CYP7B1O75881 506 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 FSBPO95073 299 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 VIL1P09327 827 aaKnown RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 SERPINA4P29622 427 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 BTN3A2P78410 334 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 BHMTQ93088 406 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 PTCD3Q96EY7 689 aaKnown RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 TUT1Q9H6E5 874 aaKnown RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 FBXO28Q9NVF7 368 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 PCDHGA3Q9Y5H0 932 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 BTN3A1O00481 513 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ANXA5P08758 320 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 LTA4HP09960 611 aaKnown RBP13.26□□□□□ -0.29
HLCS-201ENST00000336648 CLCN5P51795 746 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ADIGQ0VDE8 80 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ARCQ7LC44 396 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 FAM20CQ8IXL6 584 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ETNPPLQ8TBG4 499 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 MYLPFQ96A32 169 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 NACC2Q96BF6 587 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 TMEM138Q9NPI0 162 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 CATSPERZQ9NTU4 200 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 SNCAIPQ9Y6H5 919 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 QRICH2Q9H0J4 1663 aa13.26□□□□□ -0.29
HLCS-201ENST00000336648 ZCCHC11Q5TAX3 1644 aaKnown RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 VAPBO95292 243 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 ACLYP53396 1101 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 RFT1Q96AA3 541 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 PPP3R2Q96LZ3 170 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 PLGRKTQ9HBL7 147 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 ABCC13Q9NSE7 274 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 AKAP7Q9P0M2 348 aaPredicted RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 RGL2O15211 777 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 SNAP91O60641 907 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 COX7A2P14406 83 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 ITGA3P26006 1051 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 MMP13P45452 471 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 ZNHIT3Q15649 155 aaPredicted RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 GRIK4Q16099 956 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 CRY1Q16526 586 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 RFX4Q33E94 735 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 PABPC1LQ4VXU2 614 aaKnown RBP13.25□□□□□ -0.29
HLCS-201ENST00000336648 FAM220AQ7Z4H9 259 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 CDHR5Q9HBB8 845 aa13.25□□□□□ -0.29
HLCS-201ENST00000336648 SPG21Q9NZD8 308 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms