RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ATG14Q6ZNE5 492 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 NLRP9Q7RTR0 991 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 CHSY1Q86X52 802 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 DCLK2Q8N568 766 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 NAT14Q8WUY8 206 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 WBP2Q969T9 261 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 SGF29Q96ES7 293 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 ZNF512Q96ME7 567 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-201ENST00000336180 SPON2Q9BUD6 331 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 SMOC2Q9H3U7 446 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 TMEM216Q9P0N5 145 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 PRKAG3Q9UGI9 489 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 OR51F1A6NGY5 319 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 ATF6P18850 670 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 GLDCP23378 1020 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 ZBTB16Q05516 673 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 KLHL29Q96CT2 875 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 HDAC11Q96DB2 347 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 HEY2Q9UBP5 337 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 PLLPQ9Y342 182 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 KCTD3Q9Y597 815 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 A0A0D9SEW6 157 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 SMAPO00193 183 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 TLR5O60602 858 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 FSBPO95073 299 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 MX2P20592 715 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 SERPINB3P29508 390 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 CD86P42081 329 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 FAM189BP81408 668 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 E2F5Q15329 346 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 CNGA3Q16281 694 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 SUGP1Q8IWZ8 645 aaKnown RBP12.81□□□□□ -0.36
LIMK1-201ENST00000336180 OR52K2Q8NGK3 314 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 C10orf82Q8WW14 230 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 PGAP3Q96FM1 320 aaPredicted RBP12.81□□□□□ -0.36
LIMK1-201ENST00000336180 TMEM120AQ9BXJ8 343 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 FSD1LQ9BXM9 530 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 ARHGEF38Q9NXL2 777 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 IGSF9Q9P2J2 1179 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 G3BP2Q9UN86 482 aaKnown RBP12.81□□□□□ -0.36
LIMK1-201ENST00000336180 TSC2P49815 1807 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 KCNU1A8MYU2 1149 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 ZNF487B1APH4 448 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 IGLV3-25P01717 112 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 KRT16P08779 473 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 MYL2P10916 166 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 RPS24P62847 133 aaKnown RBP12.81□□□□□ -0.36
LIMK1-201ENST00000336180 NKX3-2P78367 333 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 SLC18A2Q05940 514 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 RAPH1Q70E73 1250 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 MON1AQ86VX9 555 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 KCNMB4Q86W47 210 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 SPATS2Q86XZ4 545 aaKnown RBP12.81□□□□□ -0.36
LIMK1-201ENST00000336180 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIMK1-201ENST00000336180 IRGQQ8WZA9 623 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 SEPT8Q92599 483 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 NDNQ99608 321 aa12.81□□□□□ -0.36
LIMK1-201ENST00000336180 VWA8A3KMH1 1905 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 ZCWPW2A0A1B0GU75 182 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 SP100P23497 879 aaPredicted RBP12.8□□□□□ -0.36
LIMK1-201ENST00000336180 APLP1P51693 650 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 NIPAL4Q0D2K0 466 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 VWA5B1Q5TIE3 1220 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 OR7D4Q8NG98 312 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 LRRC37BQ96QE4 947 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 EMCNQ9ULC0 261 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 SPAG6O75602 509 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 SEC24AO95486 1093 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 MLLT6P55198 1093 aaPredicted RBP12.8□□□□□ -0.36
LIMK1-201ENST00000336180 FASTKD1Q53R41 847 aaKnown RBP12.8□□□□□ -0.36
LIMK1-201ENST00000336180 LGSNQ5TDP6 509 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 FSTL4Q6MZW2 842 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 SLC41A1Q8IVJ1 513 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 FBXO22Q8NEZ5 403 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 CDKL2Q92772 493 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 EBF4Q9BQW3 602 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 VN1R3Q9BXE9 311 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 PNPLA8Q9NP80 782 aa12.8□□□□□ -0.36
LIMK1-201ENST00000336180 ALDH7A1P49419 539 aaKnown RBP12.79□□□□□ -0.36
LIMK1-201ENST00000336180 SGSHP51688 502 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 MNAT1P51948 309 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 PLD1Q13393 1074 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 RCN2Q14257 317 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 NFE2Q16621 373 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-201ENST00000336180 ZNF789Q5FWF6 425 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 ARTNQ5T4W7 220 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 YTHDF3Q7Z739 585 aaKnown RBP12.79□□□□□ -0.36
LIMK1-201ENST00000336180 DENND1CQ8IV53 801 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 C10orf107Q8IVU9 208 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 LGI2Q8N0V4 545 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 E2F7Q96AV8 911 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 HHIPL1Q96JK4 782 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 LRRC40Q9H9A6 602 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 SP110Q9HB58 689 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 CYP4F11Q9HBI6 524 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 GLOD4Q9HC38 313 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 SNX15Q9NRS6 342 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms